Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACGTHP_RS08725 | Genome accession | NZ_CP171396 |
| Coordinates | 1888894..1889319 (+) | Length | 141 a.a. |
| NCBI ID | WP_005130737.1 | Uniprot ID | A0AAX0TXJ3 |
| Organism | Acinetobacter baumannii strain T14 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1883894..1894319
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACGTHP_RS08715 (ACGTHP_08715) | pilY1 | 1884548..1888402 (+) | 3855 | WP_023896142.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACGTHP_RS08720 (ACGTHP_08720) | pilY2 | 1888415..1888897 (+) | 483 | WP_001046413.1 | type IV pilin protein | Machinery gene |
| ACGTHP_RS08725 (ACGTHP_08725) | pilE | 1888894..1889319 (+) | 426 | WP_005130737.1 | type IV pilin protein | Machinery gene |
| ACGTHP_RS08730 (ACGTHP_08730) | rpsP | 1889466..1889717 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACGTHP_RS08735 (ACGTHP_08735) | rimM | 1889737..1890285 (+) | 549 | WP_005130741.1 | ribosome maturation factor RimM | - |
| ACGTHP_RS08740 (ACGTHP_08740) | trmD | 1890331..1891071 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACGTHP_RS08745 (ACGTHP_08745) | rplS | 1891279..1891647 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACGTHP_RS08750 (ACGTHP_08750) | - | 1891700..1892641 (-) | 942 | WP_098713316.1 | triacylglycerol lipase | - |
| ACGTHP_RS08755 (ACGTHP_08755) | - | 1892756..1893790 (-) | 1035 | WP_002062194.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15191.34 Da Isoelectric Point: 7.1291
>NTDB_id=1061095 ACGTHP_RS08725 WP_005130737.1 1888894..1889319(+) (pilE) [Acinetobacter baumannii strain T14]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLHKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLHKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1061095 ACGTHP_RS08725 WP_005130737.1 1888894..1889319(+) (pilE) [Acinetobacter baumannii strain T14]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCATAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCATAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.163 |
100 |
0.972 |
| comF | Acinetobacter baylyi ADP1 |
51.429 |
99.291 |
0.511 |