Detailed information NTG1060234

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACF3N8_RS07430
• Genome accession: NZ_CP171119
• Coordinates: 1529966..1532440 (+)
• Length: 824 a.a.
• NCBI ID: WP_238093371.1
• Uniprot ID: -
• Organism: Staphylococcus massiliensis strain WGS1515
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1524966..1537440

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACF3N8_RS07410 (ACF3N8_07410)	-	1525445..1526443 (-)	999	WP_009382645.1	LLM class flavin-dependent oxidoreductase	-
ACF3N8_RS07415 (ACF3N8_07415)	-	1526921..1528060 (+)	1140	WP_392449795.1	cysteine desulfurase family protein	-
ACF3N8_RS07420 (ACF3N8_07420)	mnmA	1528064..1529173 (+)	1110	WP_238093368.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACF3N8_RS07425 (ACF3N8_07425)	-	1529297..1529962 (+)	666	WP_238093369.1	lipopolysaccharide assembly protein LapB	-
ACF3N8_RS07430 (ACF3N8_07430)	recD2	1529966..1532440 (+)	2475	WP_238093371.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACF3N8_RS07435 (ACF3N8_07435)	alaS	1532672..1535302 (+)	2631	WP_238101944.1	alanine--tRNA ligase	-
ACF3N8_RS07440 (ACF3N8_07440)	-	1535363..1535626 (+)	264	WP_238093373.1	IreB family regulatory phosphoprotein	-
ACF3N8_RS07445 (ACF3N8_07445)	ruvX	1535628..1536056 (+)	429	WP_238093374.1	Holliday junction resolvase RuvX	-
ACF3N8_RS07450 (ACF3N8_07450)	-	1536070..1536390 (+)	321	WP_009382635.1	DUF1292 domain-containing protein	-
ACF3N8_RS07455 (ACF3N8_07455)	-	1536600..1536971 (+)	372	WP_238100805.1	hypothetical protein	-

Sequence

Protein

• Length: 824 a.a.
• Molecular weight: 93305.76 Da
• Isoelectric Point: 4.5051

>NTDB_id=1060234 ACF3N8_RS07430 WP_238093371.1 1529966..1532440(+) (recD2) [Staphylococcus massiliensis strain WGS1515]
MSEPTLFDYSIIKGTVEIVLFQNKENFYTVLKVDKIESNEDFDDSPTIVGFFPNIQEGDTYTFKGQIVEHPKYGKQLKTE
TFEKEMPQTKDAIINYLSSDLFKGIGKKTATTIVETLGENAINDILNDKTVLDQVPRLNKKKKDQIAEQIQSNQETEKIM
IQLHDLGFGAKLAMAIYQVYFGDTLDVINKEPYRLVYDVKGIGFNKADQLATKIGIAFNDDERIKAGLLYVLEEQCVKEG
HTYLTIETLTQEALKILSRSDEEAIQSDQLENMIEQLSEERKLIKDNGVVSIPSLYYSELKSAQNIFRTVTHDHQFKTIE
QSDLQLRIGEIEEHNNVTYAKSQREALETAMNSKVMLLTGGPGTGKTTVIKGIVELYAEVHGISLDYDDYQEDDYPVVLA
APTGRASKRLYESTGLEAMTIHRLIGWSQDTKPEDILDNEINAKLIIIDEMSMVDTWLFHQFMSAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDANVLKRINLTEVYRQQDGSSIIQLAHQIKHKAPVDVTARFHDRSFIPCDTSQIADVVEKIVKNAV
TKGYDMTDIQVLAPMYRGNAGIKRLNQVLQNILNPLEDDKRQIEFGDVLFRKGDKVLQLVNRPNDNIFNGDIGEIIGVFW
AKENALNKDVLIVDFDGNEITFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPMVKQYFRMLQRPILYTGLTRAKQSLVFL
GDPSAFELGLNTEGQMRMTRLKSYLEAYFDGKSVNEVEVESKDKVQSSPDSKDNQSVRNETEDEPSSEDEALITLSESTI
YHINPMINMGDITPYDFLEIDNEA

Nucleotide

• Length: 2475 bp

>NTDB_id=1060234 ACF3N8_RS07430 WP_238093371.1 1529966..1532440(+) (recD2) [Staphylococcus massiliensis strain WGS1515]
ATGTCAGAACCTACATTGTTTGATTATTCCATCATCAAAGGTACGGTTGAAATCGTTCTTTTCCAGAATAAGGAAAATTT
CTATACGGTATTAAAAGTAGATAAAATTGAATCAAACGAAGACTTTGATGATTCACCGACGATTGTAGGTTTCTTTCCGA
ATATCCAAGAAGGCGATACATACACGTTTAAAGGTCAAATTGTCGAACACCCGAAGTATGGTAAGCAGCTAAAAACAGAA
ACGTTTGAAAAGGAAATGCCTCAAACCAAAGACGCTATCATTAATTATTTATCGAGTGACTTATTTAAAGGTATAGGTAA
AAAGACAGCTACTACGATTGTCGAAACACTTGGTGAAAATGCGATTAATGATATCCTTAACGATAAAACGGTGCTAGATC
AGGTACCACGCTTAAATAAGAAGAAAAAAGATCAAATTGCTGAACAAATCCAAAGTAACCAAGAAACTGAAAAAATTATG
ATTCAGCTTCATGATTTAGGCTTTGGTGCAAAGCTTGCGATGGCGATTTATCAAGTATATTTCGGTGATACGTTAGATGT
TATTAATAAGGAACCGTATCGACTCGTATATGATGTAAAGGGCATAGGGTTTAATAAAGCTGACCAGTTAGCGACTAAAA
TTGGCATTGCTTTTAACGATGATGAACGGATTAAAGCAGGATTGCTCTACGTCTTAGAGGAACAATGCGTTAAGGAAGGT
CATACGTATTTAACGATTGAAACGCTTACTCAAGAAGCGCTGAAAATCTTAAGTCGTAGTGATGAAGAAGCCATACAATC
AGATCAGTTAGAAAATATGATTGAGCAACTTAGCGAGGAACGTAAACTCATCAAAGATAATGGTGTCGTATCAATTCCAA
GTCTATATTACTCTGAGCTTAAAAGTGCGCAAAATATCTTCCGCACTGTGACGCATGACCACCAATTTAAGACGATTGAA
CAGTCCGATTTGCAACTTCGAATCGGTGAAATTGAAGAACATAACAATGTTACTTATGCGAAGTCTCAACGTGAGGCTTT
AGAGACTGCAATGAATTCGAAAGTCATGCTATTAACAGGTGGTCCTGGTACGGGTAAGACAACGGTAATCAAAGGAATTG
TTGAACTTTATGCAGAGGTGCACGGAATTTCACTAGATTATGATGATTATCAAGAGGACGACTATCCCGTCGTTCTAGCT
GCTCCGACTGGACGTGCGTCAAAGCGTCTTTACGAATCGACAGGTTTAGAAGCGATGACCATTCATCGACTTATAGGTTG
GAGTCAAGATACGAAACCTGAAGATATTCTAGATAATGAAATTAACGCGAAATTGATTATTATTGATGAAATGTCGATGG
TAGATACATGGTTGTTCCACCAATTTATGAGCGCTGTGCCAATAGACGCCCAAGTCATTCTTGTCGGGGATGAAGACCAA
TTGCCTTCAGTAGGGCCCGGGCAAGTCTTCAAGGACTTGATTGACGCGAATGTGTTAAAGCGTATTAACCTTACCGAAGT
ATATCGACAACAAGACGGTTCAAGTATTATCCAACTTGCGCATCAAATTAAGCATAAGGCGCCGGTTGATGTTACTGCGC
GTTTCCATGACCGTAGTTTTATTCCATGTGATACAAGTCAGATTGCTGACGTCGTTGAGAAGATTGTGAAGAACGCCGTT
ACTAAAGGTTACGATATGACAGATATCCAAGTATTAGCTCCGATGTATCGTGGTAATGCAGGGATCAAACGTCTGAACCA
AGTACTGCAGAACATTTTAAATCCGCTTGAAGATGATAAGCGTCAAATTGAGTTTGGCGATGTTCTTTTTCGAAAAGGCG
ATAAAGTCTTGCAACTCGTTAATCGTCCGAATGATAATATCTTTAACGGTGATATCGGCGAAATTATTGGTGTCTTTTGG
GCAAAAGAGAATGCTTTAAATAAAGACGTCCTTATCGTCGACTTTGATGGCAATGAAATCACATTTACGAAGCAAGATAT
GATGGAGTTGACCCATGCGTATTGTACATCCATTCATAAAGCTCAAGGGTCTGAATTTCCGATTGTCATAATGCCAATGG
TTAAACAATACTTTAGAATGTTGCAACGACCGATATTATATACTGGTCTCACGCGAGCTAAGCAGTCGTTAGTATTCTTA
GGTGATCCGAGTGCTTTCGAACTAGGACTTAATACGGAAGGGCAAATGCGCATGACGCGCTTGAAATCGTATCTTGAGGC
ATATTTCGATGGTAAGAGCGTCAATGAAGTTGAAGTGGAATCGAAAGATAAGGTTCAGTCTTCACCTGATTCAAAAGACA
ATCAAAGTGTACGAAATGAAACTGAGGATGAACCCTCTAGTGAAGATGAAGCTTTAATTACGCTTTCTGAATCGACGATA
TATCATATTAACCCTATGATTAATATGGGTGACATCACGCCATATGACTTCTTAGAAATTGACAATGAAGCTTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (339-543)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (672-719)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.695	99.636	0.495