Detailed information NTG1059127

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACF3DW_RS13175
• Genome accession: NZ_CP170746
• Coordinates: 3014675..3015781 (-)
• Length: 368 a.a.
• NCBI ID: WP_016874081.1
• Uniprot ID: -
• Organism: Chlorogloeopsis fritschii PCC 6912
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3009675..3020781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACF3DW_RS13155 (ACF3DW_13155)	-	3010020..3010250 (+)	231	WP_016874076.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
ACF3DW_RS13160 (ACF3DW_13160)	-	3010404..3012869 (-)	2466	WP_016874078.1	type IV pilus secretin family protein	-
ACF3DW_RS13165 (ACF3DW_13165)	-	3013154..3013912 (-)	759	WP_016874079.1	hypothetical protein	-
ACF3DW_RS13170 (ACF3DW_13170)	-	3013909..3014670 (-)	762	WP_016874080.1	PilN domain-containing protein	-
ACF3DW_RS13175 (ACF3DW_13175)	pilM	3014675..3015781 (-)	1107	WP_016874081.1	type IV pilus assembly protein PilM	Machinery gene
ACF3DW_RS13180 (ACF3DW_13180)	-	3015949..3017253 (+)	1305	WP_016874082.1	sugar ABC transporter substrate-binding protein	-
ACF3DW_RS13185 (ACF3DW_13185)	-	3017308..3018561 (-)	1254	WP_016874083.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
ACF3DW_RS13190 (ACF3DW_13190)	-	3018704..3018829 (-)	126	WP_016874084.1	photosystem II protein Y	-
ACF3DW_RS13195 (ACF3DW_13195)	-	3019322..3019852 (-)	531	WP_026087419.1	gamma carbonic anhydrase family protein	-
ACF3DW_RS13200 (ACF3DW_13200)	-	3020055..3020567 (+)	513	WP_039751075.1	TIGR02652 family protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40285.27 Da
• Isoelectric Point: 4.4629

>NTDB_id=1059127 ACF3DW_RS13175 WP_016874081.1 3014675..3015781(-) (pilM) [Chlorogloeopsis fritschii PCC 6912]
MVKSFTSLFGKSNKGVGIELAPQCVNVARLRKQRQGLKLDALTSVSVPEGVFIDGQIADPPAMAQIIQQALSESKINASR
VATSVTGRDSVVRLIPVPAELDDKELREMVLNHEAGLYLPYPREEADVDYQKLGYFVDEDGIEKVQVLLVATRKEITDTY
IRTFEQAGLQIDVLEINSFALIRTIRDQLRQFGPQEAAVLVDIEFDSTEIAIVVNGVPQFSRTVPLGTYQMQMALAKAMS
VPASRDMELLRGITIPLTPQDAGKTGVTEANPGLAAMMRVLGELTDELRRSIDFYLNQSENLEVAQIFLAGAGGGLAQLD
EFFTQRLSLPTSQIDPVGALSLQIDEEKYPPVQRPGLGIVLGLGMREV

Nucleotide

• Length: 1107 bp

>NTDB_id=1059127 ACF3DW_RS13175 WP_016874081.1 3014675..3015781(-) (pilM) [Chlorogloeopsis fritschii PCC 6912]
GTGGTTAAAAGCTTCACGAGTCTGTTTGGCAAATCTAATAAAGGAGTTGGCATCGAACTTGCACCACAATGCGTGAATGT
AGCCCGTTTACGCAAGCAACGCCAAGGTCTGAAACTAGACGCTTTAACATCTGTGTCAGTTCCAGAAGGTGTTTTTATCG
ATGGTCAAATTGCCGATCCTCCAGCAATGGCACAAATTATTCAGCAGGCACTCTCAGAAAGTAAAATCAACGCTTCTAGA
GTTGCGACTTCTGTGACGGGACGAGATTCAGTTGTGCGTCTAATACCCGTCCCAGCAGAATTAGATGATAAAGAACTACG
GGAGATGGTACTAAACCATGAGGCAGGTTTGTATTTGCCTTATCCCCGTGAAGAAGCTGATGTAGATTATCAGAAACTTG
GGTACTTCGTAGATGAGGATGGCATCGAAAAGGTACAGGTACTTCTTGTTGCTACTCGCAAGGAAATCACTGATACCTAT
ATAAGAACATTTGAACAGGCAGGATTGCAAATCGATGTATTAGAGATTAACAGTTTTGCGCTGATTCGCACAATTCGCGA
TCAATTGCGGCAATTTGGGCCGCAAGAAGCAGCAGTGCTTGTCGATATAGAATTTGACAGCACAGAAATTGCCATTGTTG
TAAATGGAGTACCGCAATTTTCGCGGACAGTGCCGCTTGGAACTTATCAAATGCAAATGGCACTCGCGAAGGCAATGAGT
GTACCTGCATCACGAGATATGGAGTTGTTGCGGGGAATAACCATTCCTTTAACTCCACAAGATGCAGGGAAAACAGGTGT
CACCGAGGCGAATCCTGGGTTAGCAGCAATGATGCGGGTGTTAGGAGAACTCACAGACGAACTGCGCCGTTCCATCGATT
TTTATCTCAATCAAAGTGAAAACTTGGAAGTTGCGCAGATTTTTTTGGCAGGAGCAGGAGGTGGGCTAGCACAGTTGGAT
GAATTTTTTACACAGCGATTGAGCTTACCAACCTCTCAAATAGATCCCGTCGGTGCTTTGTCATTACAAATTGATGAAGA
AAAATACCCCCCAGTGCAACGCCCTGGGTTAGGAATAGTGCTTGGACTTGGAATGCGGGAGGTGTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (283-366)

• Type IV pilus assembly protein PilM; (PilM_2) (17-236)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	65.94	99.728	0.658