Detailed information NTG1059108

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACF3DV_RS12585
• Genome accession: NZ_CP170743
• Coordinates: 2915925..2917031 (-)
• Length: 368 a.a.
• NCBI ID: WP_016874081.1
• Uniprot ID: -
• Organism: Chlorogloeopsis fritschii PCC 9212
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2910925..2922031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACF3DV_RS12565 (ACF3DV_12565)	-	2911270..2911500 (+)	231	WP_016874076.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
ACF3DV_RS12570 (ACF3DV_12570)	-	2911654..2914119 (-)	2466	WP_016874078.1	type IV pilus secretin family protein	-
ACF3DV_RS12575 (ACF3DV_12575)	-	2914404..2915162 (-)	759	WP_016874079.1	hypothetical protein	-
ACF3DV_RS12580 (ACF3DV_12580)	-	2915159..2915920 (-)	762	WP_016874080.1	PilN domain-containing protein	-
ACF3DV_RS12585 (ACF3DV_12585)	pilM	2915925..2917031 (-)	1107	WP_016874081.1	type IV pilus assembly protein PilM	Machinery gene
ACF3DV_RS12590 (ACF3DV_12590)	-	2917199..2918503 (+)	1305	WP_016874082.1	sugar ABC transporter substrate-binding protein	-
ACF3DV_RS12595 (ACF3DV_12595)	-	2918558..2919811 (-)	1254	WP_016874083.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
ACF3DV_RS12600 (ACF3DV_12600)	-	2919954..2920079 (-)	126	WP_016874084.1	photosystem II protein Y	-
ACF3DV_RS12605 (ACF3DV_12605)	-	2920572..2921102 (-)	531	WP_026087419.1	gamma carbonic anhydrase family protein	-
ACF3DV_RS12610 (ACF3DV_12610)	-	2921305..2921817 (+)	513	WP_039751075.1	TIGR02652 family protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40285.27 Da
• Isoelectric Point: 4.4629

>NTDB_id=1059108 ACF3DV_RS12585 WP_016874081.1 2915925..2917031(-) (pilM) [Chlorogloeopsis fritschii PCC 9212]
MVKSFTSLFGKSNKGVGIELAPQCVNVARLRKQRQGLKLDALTSVSVPEGVFIDGQIADPPAMAQIIQQALSESKINASR
VATSVTGRDSVVRLIPVPAELDDKELREMVLNHEAGLYLPYPREEADVDYQKLGYFVDEDGIEKVQVLLVATRKEITDTY
IRTFEQAGLQIDVLEINSFALIRTIRDQLRQFGPQEAAVLVDIEFDSTEIAIVVNGVPQFSRTVPLGTYQMQMALAKAMS
VPASRDMELLRGITIPLTPQDAGKTGVTEANPGLAAMMRVLGELTDELRRSIDFYLNQSENLEVAQIFLAGAGGGLAQLD
EFFTQRLSLPTSQIDPVGALSLQIDEEKYPPVQRPGLGIVLGLGMREV

Nucleotide

• Length: 1107 bp

>NTDB_id=1059108 ACF3DV_RS12585 WP_016874081.1 2915925..2917031(-) (pilM) [Chlorogloeopsis fritschii PCC 9212]
GTGGTTAAAAGCTTCACGAGTCTGTTTGGCAAATCTAATAAAGGAGTTGGCATCGAACTTGCACCACAATGCGTGAATGT
AGCCCGTTTACGCAAGCAACGCCAAGGTCTGAAACTAGACGCTTTAACATCTGTGTCAGTTCCAGAAGGTGTTTTTATCG
ATGGTCAAATTGCCGATCCTCCAGCAATGGCACAAATTATTCAGCAGGCACTCTCAGAAAGTAAAATCAACGCTTCTAGA
GTTGCGACTTCTGTGACGGGACGAGATTCAGTTGTGCGTCTAATACCCGTCCCAGCAGAATTAGATGATAAAGAACTACG
GGAGATGGTACTAAACCATGAGGCAGGTTTGTATTTGCCTTATCCCCGTGAAGAAGCTGATGTAGATTATCAGAAACTTG
GGTACTTCGTAGATGAGGATGGCATCGAAAAGGTACAGGTACTTCTTGTTGCTACTCGCAAGGAAATCACTGATACCTAT
ATAAGAACATTTGAACAGGCAGGATTGCAAATCGATGTATTAGAGATTAACAGTTTTGCGCTGATTCGCACAATTCGCGA
TCAATTGCGGCAATTTGGGCCGCAAGAAGCAGCAGTGCTTGTCGATATAGAATTTGACAGCACAGAAATTGCCATTGTTG
TAAATGGAGTACCGCAATTTTCGCGGACAGTGCCGCTTGGAACTTATCAAATGCAAATGGCACTCGCGAAGGCAATGAGT
GTACCTGCATCACGAGATATGGAGTTGTTGCGGGGAATAACCATTCCTTTAACTCCACAAGATGCAGGGAAAACAGGTGT
CACCGAGGCGAATCCTGGGTTAGCAGCAATGATGCGGGTGTTAGGAGAACTCACAGACGAACTGCGCCGTTCCATCGATT
TTTATCTCAATCAAAGTGAAAACTTGGAAGTTGCGCAGATTTTTTTGGCAGGAGCAGGAGGTGGGCTAGCACAGTTGGAT
GAATTTTTTACACAGCGATTGAGCTTACCAACCTCTCAAATAGATCCCGTCGGTGCTTTGTCATTACAAATTGATGAAGA
AAAATACCCCCCAGTGCAACGCCCTGGGTTAGGAATAGTGCTTGGACTTGGAATGCGGGAGGTGTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (283-366)

• Type IV pilus assembly protein PilM; (PilM_2) (17-236)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	65.94	99.728	0.658