Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ACFIOM_RS07945 | Genome accession | NZ_CP170425 |
| Coordinates | 1630255..1630554 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain t197 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1625255..1635554
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFIOM_RS07920 | gcvPA | 1626467..1627813 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| ACFIOM_RS07925 | gcvT | 1627833..1628924 (-) | 1092 | WP_410531735.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACFIOM_RS07930 | - | 1629083..1629607 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| ACFIOM_RS07935 | - | 1629597..1629743 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACFIOM_RS07940 | comGF | 1629840..1630337 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACFIOM_RS07945 | comGE | 1630255..1630554 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| ACFIOM_RS07950 | comGD | 1630541..1630987 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACFIOM_RS07955 | comGC | 1630965..1631276 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACFIOM_RS07960 | comGB | 1631290..1632360 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACFIOM_RS07965 | comGA | 1632332..1633306 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACFIOM_RS07970 | - | 1633358..1633981 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ACFIOM_RS07975 | - | 1633978..1634307 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACFIOM_RS07980 | - | 1634307..1635293 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| ACFIOM_RS07985 | - | 1635290..1635493 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1057146 ACFIOM_RS07945 WP_000844413.1 1630255..1630554(-) (comGE) [Staphylococcus aureus strain t197]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1057146 ACFIOM_RS07945 WP_000844413.1 1630255..1630554(-) (comGE) [Staphylococcus aureus strain t197]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |