Detailed information NTG0105604

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: R8953_RS03670
• Genome accession: NZ_AP028409
• Coordinates: 731319..732056 (-)
• Length: 245 a.a.
• NCBI ID: WP_002780246.1
• Uniprot ID: A0A5T1L8T6
• Organism: Campylobacter coli strain IDH-11999
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 726319..737056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8953_RS03630 (I11999_07200)	-	726432..727193 (+)	762	WP_025431509.1	ATP-binding protein	-
R8953_RS03635 (I11999_07210)	-	727190..727873 (+)	684	WP_002791740.1	3-methyladenine DNA glycosylase	-
R8953_RS03640 (I11999_07220)	thiD	727873..728685 (+)	813	WP_002797568.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
R8953_RS03645 (I11999_07230)	thiE	728675..729307 (+)	633	WP_002777120.1	thiamine phosphate synthase	-
R8953_RS03650 (I11999_07240)	-	729285..729914 (+)	630	WP_052774030.1	uroporphyrinogen-III synthase	-
R8953_RS03655 (I11999_07250)	-	729907..730359 (-)	453	WP_002777117.1	hypothetical protein	-
R8953_RS03660 (I11999_07260)	-	730356..731024 (-)	669	WP_052774029.1	hypothetical protein	-
R8953_RS03665 (I11999_07270)	ctsT	731017..731322 (-)	306	WP_052774028.1	hypothetical protein	Machinery gene
R8953_RS03670 (I11999_07280)	proC	731319..732056 (-)	738	WP_002780246.1	pyrroline-5-carboxylate reductase	Machinery gene
R8953_RS03675 (I11999_07290)	fliW	732056..732445 (-)	390	WP_002777093.1	flagellar assembly protein FliW	-
R8953_RS03680 (I11999_07300)	-	732609..733256 (+)	648	WP_002780248.1	outer membrane protein assembly factor BamD	-
R8953_RS03685 (I11999_07310)	lon	733272..735647 (+)	2376	WP_002783351.1	endopeptidase La	-
R8953_RS03690 (I11999_07320)	rpsR	735704..735964 (-)	261	WP_002777087.1	30S ribosomal protein S18	-
R8953_RS03695 (I11999_07330)	-	735975..736523 (-)	549	WP_002777084.1	single-stranded DNA-binding protein	-
R8953_RS03700 (I11999_07340)	rpsF	736532..736909 (-)	378	WP_002777082.1	30S ribosomal protein S6	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26797.20 Da
• Isoelectric Point: 9.3032

>NTDB_id=105604 R8953_RS03670 WP_002780246.1 731319..732056(-) (proC) [Campylobacter coli strain IDH-11999]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=105604 R8953_RS03670 WP_002780246.1 731319..732056(-) (proC) [Campylobacter coli strain IDH-11999]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTCT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A5T1L8T6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792