Detailed information NTG1055628

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACFDHW_RS10565
• Genome accession: NZ_CP170222
• Coordinates: 2123530..2125902 (-)
• Length: 790 a.a.
• NCBI ID: WP_107633038.1
• Uniprot ID: -
• Organism: Staphylococcus hyicus strain SC382
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2118530..2130902

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFDHW_RS10540 (ACFDHW_10545)	-	2118667..2119311 (-)	645	WP_039645444.1	O-methyltransferase	-
ACFDHW_RS10545 (ACFDHW_10550)	-	2119576..2119896 (-)	321	WP_039645442.1	DUF1292 domain-containing protein	-
ACFDHW_RS10550 (ACFDHW_10555)	ruvX	2119911..2120339 (-)	429	WP_039645440.1	Holliday junction resolvase RuvX	-
ACFDHW_RS10555 (ACFDHW_10560)	-	2120332..2120604 (-)	273	WP_039645438.1	IreB family regulatory phosphoprotein	-
ACFDHW_RS10560 (ACFDHW_10565)	alaS	2120668..2123298 (-)	2631	WP_305850047.1	alanine--tRNA ligase	-
ACFDHW_RS10565 (ACFDHW_10570)	recD2	2123530..2125902 (-)	2373	WP_107633038.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACFDHW_RS10570 (ACFDHW_10575)	-	2125906..2126580 (-)	675	WP_107633039.1	tetratricopeptide repeat protein	-
ACFDHW_RS10575 (ACFDHW_10580)	mnmA	2126621..2127733 (-)	1113	WP_305849961.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACFDHW_RS10580 (ACFDHW_10585)	-	2127730..2128875 (-)	1146	WP_107633040.1	cysteine desulfurase family protein	-
ACFDHW_RS10585 (ACFDHW_10590)	-	2129097..2130104 (+)	1008	WP_119635287.1	LLM class flavin-dependent oxidoreductase	-
ACFDHW_RS10590 (ACFDHW_10595)	-	2130138..2130302 (-)	165	WP_167694402.1	hypothetical protein	-
ACFDHW_RS10595 (ACFDHW_10600)	-	2130386..2130571 (-)	186	WP_039645424.1	CsbD family protein	-

Sequence

Protein

• Length: 790 a.a.
• Molecular weight: 89572.18 Da
• Isoelectric Point: 4.7819

>NTDB_id=1055628 ACFDHW_RS10565 WP_107633038.1 2123530..2125902(-) (recD2) [Staphylococcus hyicus strain SC382]
MENPTLFEQSYIKGNIDVILFQNSDNYYTVLKVDVEDSNEDFDNMATVVGYFPNIVEGETYTFKGQVAEHPRYGKQLKAE
TFQKEIPQTREAIIQYLSSDLFKGVGKKTAESIVDTLGDHTIQSILKDATVLEQVPKLSKAKQQQIADQVYQNQESEQIM
IRLNELGFGAKLAMDIYKFYKVDTLKIIDENPYQLVYDIRGVGFQKADQLARLIGISYTHPNRLKAGIQYIIEEICIKQG
HTYLPKDTLMKESSVLLTKQNETTIDSAMLEDVFMQLIEEKRLVDDDGHIAIPSLFYSELKSSQNVYKLMSNNVRIDTFD
QSDIQMHIGEIEETHGVSYAEAQKEALEAAMKNKLMILTGGPGTGKTTVIKGIVHLYATLHGISLNYDDYGDEDYPVVLA
APTGRASKRLHDATGLEAMTIHRLIGWNQDTKPEDILDHAIHAKLIIIDEMSMVDTWLFHQFMAAVPEDAQVVLVGDEDQ
LPSVGPGQVFRDLITSKALPRINLIEVYRQQDGSSIIELAHKMKAGLNVDITERFHDRSFIPCHIDQIPEVVRKVVTNAV
KKGYDMSDIQVLAPMYRGNAGIHKLNKVLQDILNPIEDDDTREIQFGDVVYRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVVIVDYEGNEITYLKSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVF
LGDADAFNIGIKTEGQVRLTRQQMFLEQYFNTDSETNQPVQLSEETMFKIDPMINMKNVTPYDFMEIDNV

Nucleotide

• Length: 2373 bp

>NTDB_id=1055628 ACFDHW_RS10565 WP_107633038.1 2123530..2125902(-) (recD2) [Staphylococcus hyicus strain SC382]
GTGGAAAACCCAACACTATTTGAACAGTCATATATTAAAGGCAACATCGATGTCATTCTCTTTCAAAATAGTGATAATTA
TTACACTGTCCTGAAAGTAGACGTTGAAGATTCTAATGAAGACTTCGACAATATGGCTACAGTTGTTGGGTATTTTCCAA
ATATCGTTGAAGGTGAGACGTATACGTTTAAGGGACAAGTCGCAGAACATCCCCGTTATGGCAAGCAATTAAAGGCTGAA
ACGTTTCAAAAAGAAATACCTCAAACAAGAGAGGCTATCATACAATACTTATCAAGTGATTTATTTAAGGGTGTTGGAAA
AAAAACTGCTGAATCTATCGTAGATACATTAGGTGATCATACCATTCAATCTATTTTAAAAGATGCTACAGTTCTTGAAC
AAGTTCCTAAATTATCCAAAGCCAAACAACAGCAAATCGCTGATCAAGTGTATCAAAATCAAGAAAGCGAACAGATTATG
ATTCGTTTAAATGAACTTGGTTTCGGTGCAAAACTCGCCATGGATATTTATAAATTTTATAAAGTTGACACATTAAAAAT
TATTGACGAAAACCCTTACCAACTGGTATATGATATCCGCGGTGTTGGATTTCAAAAAGCGGATCAACTCGCACGTTTAA
TTGGCATTTCATATACGCATCCCAACCGATTAAAAGCTGGGATACAATACATAATTGAAGAAATATGTATTAAACAAGGG
CATACTTATTTGCCTAAAGACACACTAATGAAAGAGTCATCCGTACTTTTAACAAAGCAAAATGAAACAACAATTGATTC
GGCAATGCTAGAAGATGTATTTATGCAACTTATAGAAGAAAAACGATTAGTAGATGATGACGGACATATCGCAATTCCGA
GCTTATTTTATTCTGAATTAAAAAGTAGTCAAAATGTGTATAAACTCATGAGCAATAATGTACGCATTGATACTTTTGAT
CAATCAGATATACAGATGCATATTGGTGAAATTGAAGAGACGCATGGTGTTTCTTATGCTGAGGCCCAAAAAGAAGCGCT
GGAAGCTGCCATGAAAAATAAATTGATGATATTAACTGGTGGTCCAGGAACAGGTAAAACTACAGTTATAAAAGGGATTG
TACATCTTTATGCAACATTACATGGCATTTCTCTAAACTATGATGACTATGGTGATGAGGATTATCCTGTTGTACTTGCA
GCTCCAACTGGGCGAGCTTCTAAACGACTTCATGATGCGACGGGATTAGAAGCTATGACGATACATCGTTTAATAGGTTG
GAATCAAGACACAAAGCCTGAAGATATACTCGATCATGCCATTCATGCCAAATTGATTATCATTGATGAAATGTCAATGG
TCGATACTTGGCTGTTCCATCAATTTATGGCGGCTGTTCCAGAAGATGCGCAAGTCGTATTGGTTGGCGATGAAGACCAG
TTACCATCTGTAGGCCCAGGTCAAGTATTTAGGGATTTAATTACCTCTAAAGCGTTGCCACGAATTAATTTAATAGAGGT
TTACCGTCAACAAGATGGGTCCAGTATCATTGAATTGGCACACAAAATGAAAGCGGGGTTAAACGTAGATATTACAGAAC
GTTTCCATGATCGCTCTTTCATTCCATGTCATATTGATCAAATTCCTGAAGTCGTACGTAAAGTGGTAACGAATGCCGTT
AAAAAAGGATATGACATGTCTGATATACAAGTACTTGCGCCCATGTATCGTGGCAATGCGGGCATTCATAAACTAAATAA
AGTGCTTCAAGATATTCTTAATCCTATTGAAGATGACGATACACGTGAAATTCAATTTGGAGATGTCGTATATCGGAAAG
GGGATAAAGTACTTCAACTCGTTAATCGACCGAATGATAATATTTTTAATGGTGATATCGGCGTTATCGTTGGCATTTTT
TGGGCTAAAGAGAATGCCCTTAATAAAGACGTTGTAATTGTGGATTATGAAGGCAATGAGATCACATATTTAAAATCAGA
TTTAACGGAATTGACACATGCATATTGTACCTCTATCCATAAAGCGCAAGGATCTGAGTTCCCAATTGTTATTATGCCAA
TCGTTAAACAATATTTTAGAATGCTCCAAAAACCAATCCTTTATACAGGACTAACACGAGCAAAACAATCACTTGTGTTT
TTAGGTGACGCAGATGCATTTAATATAGGAATAAAAACGGAAGGGCAAGTAAGATTAACACGTCAACAAATGTTTCTCGA
GCAATACTTCAACACGGATTCAGAAACAAATCAACCTGTGCAACTTAGTGAAGAGACGATGTTTAAAATAGATCCAATGA
TTAATATGAAAAATGTAACCCCCTATGATTTTATGGAAATTGACAATGTTTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

• AAA domain (AAA_30) (339-544)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-720)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	50.631	100	0.508