Detailed information NTG0105527

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: R8920_RS03545
• Genome accession: NZ_AP028404
• Coordinates: 712144..712881 (-)
• Length: 245 a.a.
• NCBI ID: WP_002780246.1
• Uniprot ID: A0A5T1L8T6
• Organism: Campylobacter coli strain BCH-11568
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 707144..717881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8920_RS03505 (B11568_06920)	-	707257..708018 (+)	762	WP_025431509.1	ATP-binding protein	-
R8920_RS03510 (B11568_06930)	-	708015..708698 (+)	684	WP_002791740.1	3-methyladenine DNA glycosylase	-
R8920_RS03515 (B11568_06940)	thiD	708698..709510 (+)	813	WP_002786353.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
R8920_RS03520 (B11568_06950)	thiE	709500..710132 (+)	633	WP_002783359.1	thiamine phosphate synthase	-
R8920_RS03525 (B11568_06960)	-	710110..710739 (+)	630	WP_002783358.1	uroporphyrinogen-III synthase	-
R8920_RS03530 (B11568_06970)	-	710732..711184 (-)	453	WP_002777117.1	hypothetical protein	-
R8920_RS03535 (B11568_06980)	-	711181..711849 (-)	669	WP_002790524.1	hypothetical protein	-
R8920_RS03540 (B11568_06990)	-	711842..712147 (-)	306	WP_002790525.1	hypothetical protein	-
R8920_RS03545 (B11568_07000)	proC	712144..712881 (-)	738	WP_002780246.1	pyrroline-5-carboxylate reductase	Machinery gene
R8920_RS03550 (B11568_07010)	fliW	712881..713270 (-)	390	WP_002777093.1	flagellar assembly protein FliW	-
R8920_RS03555 (B11568_07020)	-	713434..714081 (+)	648	WP_002780248.1	outer membrane protein assembly factor BamD	-
R8920_RS03560 (B11568_07030)	lon	714097..716472 (+)	2376	WP_002777089.1	endopeptidase La	-
R8920_RS03565 (B11568_07040)	rpsR	716528..716788 (-)	261	WP_002777087.1	30S ribosomal protein S18	-
R8920_RS03570 (B11568_07050)	-	716799..717347 (-)	549	WP_002777084.1	single-stranded DNA-binding protein	-
R8920_RS03575 (B11568_07060)	rpsF	717356..717733 (-)	378	WP_002777082.1	30S ribosomal protein S6	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26797.20 Da
• Isoelectric Point: 9.3032

>NTDB_id=105527 R8920_RS03545 WP_002780246.1 712144..712881(-) (proC) [Campylobacter coli strain BCH-11568]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=105527 R8920_RS03545 WP_002780246.1 712144..712881(-) (proC) [Campylobacter coli strain BCH-11568]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A5T1L8T6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792