Detailed information NTG1055026

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACE6HX_RS12495
• Genome accession: NZ_CP170098
• Coordinates: 2440671..2443055 (-)
• Length: 794 a.a.
• NCBI ID: WP_375566044.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain X14-67
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2435671..2448055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACE6HX_RS12460 (ACE6HX_12460)	-	2436734..2437462 (+)	729	WP_060596857.1	amino acid ABC transporter ATP-binding protein	-
ACE6HX_RS12465 (ACE6HX_12465)	-	2437476..2438285 (+)	810	WP_375566041.1	transporter substrate-binding domain-containing protein	-
ACE6HX_RS12470 (ACE6HX_12470)	-	2438366..2439019 (+)	654	WP_034661510.1	amino acid ABC transporter permease	-
ACE6HX_RS12475 (ACE6HX_12475)	-	2439035..2439685 (+)	651	WP_060596860.1	amino acid ABC transporter permease	-
ACE6HX_RS12480 (ACE6HX_12480)	-	2439721..2439852 (-)	132	WP_003216198.1	YrzQ family protein	-
ACE6HX_RS12485 (ACE6HX_12485)	-	2439873..2440064 (-)	192	WP_003216308.1	hypothetical protein	-
ACE6HX_RS12490 (ACE6HX_12490)	-	2440078..2440536 (-)	459	WP_223250481.1	prc-barrel domain-containing protein	-
ACE6HX_RS12495 (ACE6HX_12495)	recD2	2440671..2443055 (-)	2385	WP_375566044.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACE6HX_RS12500 (ACE6HX_12500)	-	2443075..2443728 (-)	654	WP_106036922.1	lipopolysaccharide assembly protein LapB	-
ACE6HX_RS12505 (ACE6HX_12505)	mnmA	2443789..2444907 (-)	1119	WP_060596862.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACE6HX_RS12510 (ACE6HX_12510)	-	2445003..2446145 (-)	1143	WP_375566046.1	cysteine desulfurase family protein	-
ACE6HX_RS12515 (ACE6HX_12515)	cymR	2446164..2446583 (-)	420	WP_012010726.1	cysteine metabolism transcriptional regulator CymR	-
ACE6HX_RS12520 (ACE6HX_12520)	-	2446790..2448055 (+)	1266	WP_034661526.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89048.60 Da
• Isoelectric Point: 5.2082

>NTDB_id=1055026 ACE6HX_RS12495 WP_375566044.1 2440671..2443055(-) (recD2) [Bacillus pumilus strain X14-67]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYIFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNEYKVTEMDVANQIIALGEGKEMIIEDERCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAVPAVTLTDIYRQADGSSIVELAHDMKNGVLPKDITARSKDRSFIKCSADQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLMQTDEVMDAELAALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=1055026 ACE6HX_RS12495 WP_375566044.1 2440671..2443055(-) (recD2) [Bacillus pumilus strain X14-67]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACAGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCAGCACTTCATGAGGAAGAAACTTACATCTTCTATGGCAAAGTCACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACGAAGCAAGGAATCATTCATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGGAAAAAGACGGCGGAAGAAATTGTGGGGCAGCTTGGCAACCAGACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTATGATGTTCCGCGCTTATCAAAAAAGAAGGCAGATAAGCTGGCCGCAGCGCTCCAGGAACATCAAGGA
TTGGAACAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCTCAGCTCAGCATGAAGATATACCAAGTGTACGAGAG
TGAAACGCTGCAAAAGATTGAGGAAAACCCGTATCAGCTCGTCAAGGATGTCGAAGGGATCGGATTTATTAAGGCGGATG
AGCTTGGCGCTAGAACCGGCATCTCAGGAAATGACCCAGAGCGAATCCGTGCAGCCCTGCTTTATACAGTCGAAACAGCA
AGTCTTCAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTTGAAACCCGCAAGCTGCTTAATCAGACAGGCAA
TGAGTACAAAGTGACGGAAATGGATGTCGCCAATCAGATCATTGCACTTGGCGAAGGGAAAGAGATGATCATTGAAGATG
AGCGCTGCTATCACCCGTCCTTATTTTATGCGGAGCAAAGTGTCGCCAAACGGATACAAAAAATCGTCTCCCAAACGGAA
TATGCAGATCAATTCCCTGAATCAGAATTCCTGCTCGCACTTGGCGAGCTCGAGGAACGGCTGGGCGTCCAGTATGCGCC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCGATGCTGCTTTTAACAGGCGGACCTGGGACTGGGAAGACAA
CGGTCATTAAAGGGATTGTTGAGCTTTACAGCGATCTTCACGGTGTATCTCTTGATCCGAGTGATTACAAAAAAGATGAA
TCCTTTCCATTTGTGCTTGCGGCGCCAACTGGACGAGCAGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTAAC
CATTCACCGTTTGCTCGGCTGGAACGGATCAGAGGGCTTTTCGCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTTGCGAATCACTTGTTTAAAGCGATTCCTGATCATATCCAAGTGATC
ATGGTAGGAGATGAACATCAGCTTCCATCTGTCGGACCAGGCCAAGTGTTAAGGGATTTACTTGCCTCACAAGCCGTACC
AGCTGTTACACTGACAGATATTTACCGGCAGGCAGACGGCTCCAGCATTGTTGAACTTGCACATGATATGAAAAATGGCG
TCCTGCCAAAAGATATTACCGCACGTTCAAAGGATCGATCTTTCATAAAATGCTCAGCTGATCAAATGAAAGAAGTGATT
GAGAAAGTCGTCAGCAATGCTGCTCAAAAAGGCTATTCAGCAAAAGACATTCAAGTGCTTGCGCCAATGTATAAAGGGAA
AGCAGGCATTAATGAGCTCAATAAAATGCTGCAGCACATTTTGAATCCAAAAAAACCAAAGGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGGACCGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCGGAAAATAATATTTTTAACGGTGATATC
GGCGAAATTGTCTCGATTTTTTATGCGAAAGAAAACACGGAAAAAGAAGACATGGCTGTGATCTCCTTTGATGGGAATGA
AATCACCTTTACAAAAAAGGATTTTCATCAATTTACACATGCCTATTGCTGCTCCATCCACAAATCACAAGGCAGTGAAT
TCCCAATCGTTGTGCTGCCAGTCGTGAGAAGCTACTACAGAATGCTGCGGCGAAATCTGCTGTACACAGCTATTACACGA
AGTAAAAAGTTTTTAATCCTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGTGTGAAAAACAATGAGGATTCGCTCAGACA
AACGTCCTTAACGATGCGGCTGATGCAAACTGATGAAGTTATGGATGCGGAGCTTGCAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.874	100	0.8