Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | BCV09_RS00905 | Genome accession | NZ_CP170013 |
| Coordinates | 201269..201787 (+) | Length | 172 a.a. |
| NCBI ID | WP_016767989.1 | Uniprot ID | A0A7Z1S257 |
| Organism | Vibrio cyclitrophicus strain 10N.286.54.C7 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 196269..206787
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCV09_RS00885 (BCV09_00885) | - | 196327..198885 (-) | 2559 | WP_010435294.1 | penicillin-binding protein 1A | - |
| BCV09_RS00890 (BCV09_00890) | pilM | 199037..200062 (+) | 1026 | WP_016767986.1 | type IV pilus assembly protein PilM | Machinery gene |
| BCV09_RS00895 (BCV09_00895) | pilN | 200046..200660 (+) | 615 | WP_010435288.1 | PilN domain-containing protein | Machinery gene |
| BCV09_RS00900 (BCV09_00900) | pilO | 200653..201282 (+) | 630 | WP_010435284.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BCV09_RS00905 (BCV09_00905) | pilP | 201269..201787 (+) | 519 | WP_016767989.1 | pilus assembly protein PilP | Machinery gene |
| BCV09_RS00910 (BCV09_00910) | pilQ | 201847..203538 (+) | 1692 | WP_010435279.1 | type IV pilus secretin PilQ | Machinery gene |
| BCV09_RS00915 (BCV09_00915) | aroK | 203715..204233 (+) | 519 | WP_009848907.1 | shikimate kinase AroK | - |
| BCV09_RS00920 (BCV09_00920) | aroB | 204258..205346 (+) | 1089 | WP_010435273.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19249.39 Da Isoelectric Point: 10.3202
>NTDB_id=1054498 BCV09_RS00905 WP_016767989.1 201269..201787(+) (pilP) [Vibrio cyclitrophicus strain 10N.286.54.C7]
MKPSNTLYSILLLLLLSGCKANEDSLEDFVVQVEVKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
MKPSNTLYSILLLLLLSGCKANEDSLEDFVVQVEVKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=1054498 BCV09_RS00905 WP_016767989.1 201269..201787(+) (pilP) [Vibrio cyclitrophicus strain 10N.286.54.C7]
ATGAAACCCAGTAACACGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGTCAAGGCGAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTGCAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
ATGAAACCCAGTAACACGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGTCAAGGCGAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTGCAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
63.19 |
94.767 |
0.599 |
| pilP | Vibrio campbellii strain DS40M4 |
55.689 |
97.093 |
0.541 |