Detailed information NTG1054487

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: BCV14_RS14480
• Genome accession: NZ_CP170011
• Coordinates: 3223214..3224239 (-)
• Length: 341 a.a.
• NCBI ID: WP_016767986.1
• Uniprot ID: -
• Organism: Vibrio cyclitrophicus strain 10N.286.54.E4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3218214..3229239

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BCV14_RS14455 (BCV14_14455)	aroK	3219043..3219561 (-)	519	WP_009848907.1	shikimate kinase AroK	-
BCV14_RS14460 (BCV14_14460)	pilQ	3219738..3221429 (-)	1692	WP_010435279.1	type IV pilus secretin PilQ	Machinery gene
BCV14_RS14465 (BCV14_14465)	pilP	3221489..3222007 (-)	519	WP_010435282.1	pilus assembly protein PilP	Machinery gene
BCV14_RS14470 (BCV14_14470)	pilO	3221994..3222623 (-)	630	WP_010435284.1	type 4a pilus biogenesis protein PilO	Machinery gene
BCV14_RS14475 (BCV14_14475)	pilN	3222616..3223230 (-)	615	WP_010435288.1	PilN domain-containing protein	Machinery gene
BCV14_RS14480 (BCV14_14480)	pilM	3223214..3224239 (-)	1026	WP_016767986.1	type IV pilus assembly protein PilM	Machinery gene
BCV14_RS14485 (BCV14_14485)	-	3224391..3226950 (+)	2560	Protein_2736	penicillin-binding protein 1A	-
BCV14_RS14490 (BCV14_14490)	oxyR	3227046..3227939 (-)	894	WP_010435297.1	DNA-binding transcriptional regulator OxyR	-
BCV14_RS14495 (BCV14_14495)	-	3228161..3228889 (+)	729	WP_010435300.1	glutathione peroxidase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 38112.77 Da
• Isoelectric Point: 6.8348

>NTDB_id=1054487 BCV14_RS14480 WP_016767986.1 3223214..3224239(-) (pilM) [Vibrio cyclitrophicus strain 10N.286.54.E4]
MGSSLITGIDINHHSIKAVVLKPVGESYALVGYKELPISDDIFTANHTLEYQKTVKKLKELRKGLPFGSRNVAISVPDNT
VISKVLQIESELEDREKEFSIYQTFAHQSPFPIEELSLDFVKLEDKRFGKGATSSYQVYATRKEVVDSRADALTKAGFKP
IVVDTQAHGLLNIWQLASHLYPEKKNWLLVDVGVDQTSLGIIPQGSAPFYKDIAFGIQDLCSTGNSMDMEGGFSNVEEKH
KFIVNLIEKLKRQLQLYSSVNALQPISGIWLMGEGASMPMVVEELERHFQLSCESLNPLSLFENKVAKKRRLPMDWQHFG
IAAGMAMSGLKWQGEKHVASN

Nucleotide

• Length: 1026 bp

>NTDB_id=1054487 BCV14_RS14480 WP_016767986.1 3223214..3224239(-) (pilM) [Vibrio cyclitrophicus strain 10N.286.54.E4]
ATGGGTTCATCATTAATTACAGGTATAGATATAAATCACCACAGCATCAAAGCCGTGGTACTAAAACCCGTTGGGGAGTC
GTATGCCCTGGTGGGATACAAAGAGCTGCCGATTTCGGACGACATTTTTACAGCTAACCATACTTTGGAGTATCAGAAAA
CTGTTAAGAAACTCAAAGAACTTAGGAAAGGGCTGCCTTTTGGAAGCCGCAACGTCGCTATTTCGGTACCGGATAACACG
GTGATCAGCAAAGTACTGCAAATAGAGAGCGAATTAGAAGATAGAGAAAAGGAGTTCTCGATCTATCAAACCTTTGCTCA
TCAATCTCCCTTTCCTATCGAGGAGCTGAGTTTAGATTTTGTAAAGCTAGAAGACAAACGATTTGGTAAAGGAGCAACAA
GCAGCTATCAAGTGTATGCGACTCGTAAAGAGGTGGTTGATAGCCGAGCTGACGCGCTAACGAAAGCAGGGTTTAAGCCC
ATCGTTGTCGACACTCAGGCCCATGGTTTACTCAACATTTGGCAATTGGCTTCGCATTTGTATCCAGAAAAAAAGAATTG
GCTGTTGGTGGATGTTGGCGTTGATCAAACTTCATTAGGCATTATTCCCCAAGGTTCAGCGCCATTTTATAAAGATATTG
CCTTTGGCATTCAAGATCTTTGCAGTACGGGTAACTCGATGGATATGGAGGGTGGGTTTAGTAACGTTGAGGAGAAGCAT
AAGTTTATTGTCAATTTGATTGAAAAACTCAAGCGTCAGTTACAGCTCTATTCATCGGTCAATGCGCTTCAACCTATCTC
AGGAATTTGGCTAATGGGCGAAGGAGCAAGTATGCCGATGGTCGTTGAAGAGTTAGAGCGACATTTTCAGTTAAGTTGTG
AGTCTTTGAACCCCCTATCTTTGTTTGAGAATAAGGTCGCGAAAAAACGTCGATTACCCATGGATTGGCAACATTTTGGT
ATTGCAGCAGGCATGGCGATGAGTGGACTCAAGTGGCAGGGAGAAAAGCATGTTGCATCAAATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (8-220)

• Type IV pilus assembly protein PilM; (PilM_2) (242-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Vibrio cholerae strain A1552	53.097	99.413	0.528
pilM	Vibrio campbellii strain DS40M4	47.661	100	0.478