Detailed information NTG1054064

Bioinformatically predicted

Overview

• Name: comGB
• Type: Machinery gene
• Locus tag: ACNUDZ_RS04665
• Genome accession: NZ_OZ197085
• Coordinates: 899676..900746 (+)
• Length: 356 a.a.
• NCBI ID: WP_000776425.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate 23S01974-1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 894676..905746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNUDZ_RS04635	-	895099..896562 (+)	1464	WP_001017856.1	rhomboid family protein	-
ACNUDZ_RS04640	-	896543..896746 (+)	204	WP_000087559.1	YqgQ family protein	-
ACNUDZ_RS04645	-	896743..897729 (+)	987	WP_000161315.1	ROK family glucokinase	-
ACNUDZ_RS04650	-	897729..898058 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACNUDZ_RS04655	-	898055..898678 (+)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ACNUDZ_RS04660	comGA	898730..899704 (+)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
ACNUDZ_RS04665	comGB	899676..900746 (+)	1071	WP_000776425.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACNUDZ_RS04670	-	900893..902063 (+)	1171	Protein_910	IS256-like element IS256 family transposase	-
ACNUDZ_RS04675	-	902130..902276 (+)	147	WP_001789879.1	hypothetical protein	-
ACNUDZ_RS04680	-	902266..902790 (+)	525	WP_001015120.1	shikimate kinase	-
ACNUDZ_RS04685	gcvT	902949..904040 (+)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
ACNUDZ_RS04690	gcvPA	904060..905406 (+)	1347	WP_000019698.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41489.97 Da
• Isoelectric Point: 10.1030

>NTDB_id=1054064 ACNUDZ_RS04665 WP_000776425.1 899676..900746(+) (comGB) [Staphylococcus aureus isolate 23S01974-1]
MKLQWINTFKLHSKKRQLSKVQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK

Nucleotide

• Length: 1071 bp

>NTDB_id=1054064 ACNUDZ_RS04665 WP_000776425.1 899676..900746(+) (comGB) [Staphylococcus aureus isolate 23S01974-1]
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGTCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGCACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAACCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTCTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTAATTTATAACAAATTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CGGGTTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTACCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGAAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA

Domains

Predicted by InterProScan.

• Type II secretion system (T2SS), protein F (T2SSF) (227-347)

• Type II secretion system (T2SS), protein F (T2SSF) (27-146)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGB	Staphylococcus aureus MW2	99.438	100	0.994
comGB	Staphylococcus aureus N315	99.438	100	0.994