Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ACNUDW_RS04675 | Genome accession | NZ_OZ197080 |
| Coordinates | 929636..929935 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus isolate 23S00032-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 924636..934935
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNUDW_RS04635 | - | 924697..924900 (+) | 204 | WP_000087559.1 | YqgQ family protein | - |
| ACNUDW_RS04640 | - | 924897..925883 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| ACNUDW_RS04645 | - | 925883..926212 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACNUDW_RS04650 | - | 926209..926832 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ACNUDW_RS04655 | comGA | 926884..927858 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACNUDW_RS04660 | comGB | 927830..928900 (+) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACNUDW_RS04665 | comGC | 928914..929225 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACNUDW_RS04670 | comGD | 929203..929649 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACNUDW_RS04675 | comGE | 929636..929935 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| ACNUDW_RS04680 | comGF | 929853..930350 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACNUDW_RS04685 | - | 930541..931712 (+) | 1172 | Protein_911 | IS256-like element IS256 family transposase | - |
| ACNUDW_RS04690 | - | 931779..931925 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACNUDW_RS04695 | - | 931915..932439 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| ACNUDW_RS04700 | gcvT | 932598..933689 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1053644 ACNUDW_RS04675 WP_000844413.1 929636..929935(+) (comGE) [Staphylococcus aureus isolate 23S00032-1]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1053644 ACNUDW_RS04675 WP_000844413.1 929636..929935(+) (comGE) [Staphylococcus aureus isolate 23S00032-1]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |