Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ABUS16_RS01570 | Genome accession | NZ_CP169833 |
| Coordinates | 312473..313114 (-) | Length | 213 a.a. |
| NCBI ID | WP_000201229.1 | Uniprot ID | A0A0J0ZM99 |
| Organism | Acinetobacter baumannii strain Rp376 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 307473..318114
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS16_RS01550 | aroK | 308389..308958 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| ABUS16_RS01555 | pilQ | 308970..311135 (-) | 2166 | WP_001017040.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| ABUS16_RS01560 | pilP | 311198..311725 (-) | 528 | WP_000695059.1 | pilus assembly protein PilP | Machinery gene |
| ABUS16_RS01565 | pilO | 311736..312476 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ABUS16_RS01570 | pilN | 312473..313114 (-) | 642 | WP_000201229.1 | PilN domain-containing protein | Machinery gene |
| ABUS16_RS01575 | pilM | 313114..314172 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| ABUS16_RS01580 | ponA | 314334..316889 (+) | 2556 | WP_000736662.1 | penicillin-binding protein PBP1a | - |
| ABUS16_RS01585 | - | 316907..317731 (-) | 825 | WP_001990541.1 | putative RNA methyltransferase | - |
| ABUS16_RS01590 | - | 317734..318066 (-) | 333 | WP_000169598.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 24063.40 Da Isoelectric Point: 5.3968
>NTDB_id=1053523 ABUS16_RS01570 WP_000201229.1 312473..313114(-) (pilN) [Acinetobacter baumannii strain Rp376]
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKSASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGVAK
MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMSTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLA
NEEKKDKSASSLLPRVEDHYGSFVVTVDLGEMGVTTTDDSAKPSTGESVGVAK
Nucleotide
Download Length: 642 bp
>NTDB_id=1053523 ABUS16_RS01570 WP_000201229.1 312473..313114(-) (pilN) [Acinetobacter baumannii strain Rp376]
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTCATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAAAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGTCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGCGAAAGTGTGGGGGTCGCTAAAT
GA
ATGGCAACAATTAATTTACTGCCTTGGCGCGAAGAGCTGAGGGAGCAACGAAAAAAACAATTCATAACGTTATGTTTTGG
GGTGGTTGTTTTGGGGATTACAACCGTATTTGGGGGATGGTTTTATTTTGACCATAAATTAGATGATCAAGAGCAAGCGA
ATCAGCTCATTATGAGCACAAATCAGAACCTTGATCAGCAATTAAAAACATTAAACGGCTTACAGGAACAGCGTGATGCC
ATTATTGAACGCATGAAGTTGATTCAAGGTTTGCAGAGTCAACGTCCAGTAGTGGTAAGACTTGTTGATGAGTTAGTTCG
AGTCACACCATCAGCTATGTATTTAACGAAATTTAGCCGAACCGGAGATAAGTTTACGATTGAAGGTAAAGCTGAAAGTC
CAAATACAGTAGCCGAACTACTCCGTAATCTTGAAGCATCTCCTTGGTATCGTAATGCTTTTATGAACTCTTTCTTGGCT
AATGAAGAGAAAAAAGATAAGTCTGCAAGTTCTCTTCTTCCTAGGGTGGAAGACCACTATGGTAGTTTTGTTGTGACTGT
CGATTTGGGGGAAATGGGCGTGACCACAACGGATGATTCTGCTAAGCCATCTACAGGCGAAAGTGTGGGGGTCGCTAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
99.061 |
100 |
0.991 |
| comN | Acinetobacter baylyi ADP1 |
72.038 |
99.061 |
0.714 |