Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   R8922_RS07475 Genome accession   NZ_AP028390
Coordinates   1436589..1437104 (-) Length   171 a.a.
NCBI ID   WP_041160206.1    Uniprot ID   A0A5Y8UQV7
Organism   Campylobacter jejuni strain BCH-11411     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1431589..1442104
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8922_RS07460 (B11411_14940) - 1431698..1433515 (-) 1818 WP_317734976.1 motility associated factor glycosyltransferase family protein -
  R8922_RS07465 (B11411_14950) - 1433512..1435335 (-) 1824 WP_317734977.1 motility associated factor glycosyltransferase family protein -
  R8922_RS07470 (B11411_14960) - 1435345..1436589 (-) 1245 WP_317734978.1 DUF2920 family protein -
  R8922_RS07475 (B11411_14970) ctsG 1436589..1437104 (-) 516 WP_041160206.1 type II secretion system protein Machinery gene
  R8922_RS07480 (B11411_14980) tsaD 1437105..1438112 (-) 1008 WP_317734979.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  R8922_RS07485 (B11411_14990) - 1438109..1439503 (-) 1395 WP_139885984.1 M99 family carboxypeptidase catalytic domain-containing protein -
  R8922_RS07490 (B11411_15000) dxr 1439505..1440575 (-) 1071 WP_139885983.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  R8922_RS07495 (B11411_15010) cdsA 1440572..1441297 (-) 726 WP_071169996.1 phosphatidate cytidylyltransferase -
  R8922_RS07500 (B11411_15020) - 1441306..1441644 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18692.59 Da        Isoelectric Point: 6.4682

>NTDB_id=105338 R8922_RS07475 WP_041160206.1 1436589..1437104(-) (ctsG) [Campylobacter jejuni strain BCH-11411]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRIGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=105338 R8922_RS07475 WP_041160206.1 1436589..1437104(-) (ctsG) [Campylobacter jejuni strain BCH-11411]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCATAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGTAATGAAGCAAGCAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y8UQV7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment