Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   R8574_RS07450 Genome accession   NZ_AP028385
Coordinates   1430949..1431464 (-) Length   171 a.a.
NCBI ID   WP_002875272.1    Uniprot ID   A0A5T0KSE7
Organism   Campylobacter jejuni strain BCH-11320     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1425949..1436464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8574_RS07435 (B11320_14860) - 1426061..1427878 (-) 1818 WP_317647609.1 motility associated factor glycosyltransferase family protein -
  R8574_RS07440 (B11320_14870) - 1427875..1429698 (-) 1824 WP_317647610.1 motility associated factor glycosyltransferase family protein -
  R8574_RS07445 (B11320_14880) - 1429708..1430949 (-) 1242 WP_317647611.1 DUF2920 family protein -
  R8574_RS07450 (B11320_14890) ctsG 1430949..1431464 (-) 516 WP_002875272.1 type II secretion system protein Machinery gene
  R8574_RS07455 (B11320_14900) tsaD 1431465..1432472 (-) 1008 WP_070306990.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  R8574_RS07460 (B11320_14910) - 1432469..1433863 (-) 1395 WP_070306991.1 M99 family carboxypeptidase catalytic domain-containing protein -
  R8574_RS07465 (B11320_14920) dxr 1433865..1434935 (-) 1071 WP_041160209.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  R8574_RS07470 (B11320_14930) cdsA 1434932..1435657 (-) 726 WP_057033757.1 phosphatidate cytidylyltransferase -
  R8574_RS07475 (B11320_14940) - 1435666..1436004 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18650.51 Da        Isoelectric Point: 6.4682

>NTDB_id=105229 R8574_RS07450 WP_002875272.1 1430949..1431464(-) (ctsG) [Campylobacter jejuni strain BCH-11320]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKECLKLLFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=105229 R8574_RS07450 WP_002875272.1 1430949..1431464(-) (ctsG) [Campylobacter jejuni strain BCH-11320]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATTAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTCTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATCTTAAGCAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0KSE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment