Detailed information NTG1052276

Bioinformatically predicted

Overview

• Name: comGB
• Type: Machinery gene
• Locus tag: ACE4RD_RS09930
• Genome accession: NZ_OZ059823
• Coordinates: 1989327..1990397 (+)
• Length: 356 a.a.
• NCBI ID: WP_000776425.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate E2_22S00623-1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1984327..1995397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACE4RD_RS09900	-	1984750..1986213 (+)	1464	WP_001017856.1	rhomboid family intramembrane serine protease	-
ACE4RD_RS09905	-	1986194..1986397 (+)	204	WP_000087559.1	YqgQ family protein	-
ACE4RD_RS09910	-	1986394..1987380 (+)	987	WP_000161315.1	ROK family glucokinase	-
ACE4RD_RS09915	-	1987380..1987709 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACE4RD_RS09920	-	1987706..1988329 (+)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ACE4RD_RS09925	comGA	1988381..1989355 (+)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
ACE4RD_RS09930	comGB	1989327..1990397 (+)	1071	WP_000776425.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACE4RD_RS09935	-	1990544..1991714 (+)	1171	Protein_1947	IS256-like element IS256 family transposase	-
ACE4RD_RS09940	-	1991781..1991927 (+)	147	WP_001789879.1	hypothetical protein	-
ACE4RD_RS09945	-	1991917..1992441 (+)	525	WP_001015120.1	shikimate kinase	-
ACE4RD_RS09950	gcvT	1992600..1993691 (+)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
ACE4RD_RS09955	gcvPA	1993711..1995057 (+)	1347	WP_000019698.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41489.97 Da
• Isoelectric Point: 10.1030

>NTDB_id=1052276 ACE4RD_RS09930 WP_000776425.1 1989327..1990397(+) (comGB) [Staphylococcus aureus isolate E2_22S00623-1]
MKLQWINTFKLHSKKRQLSKVQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKLNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK

Nucleotide

• Length: 1071 bp

>NTDB_id=1052276 ACE4RD_RS09930 WP_000776425.1 1989327..1990397(+) (comGB) [Staphylococcus aureus isolate E2_22S00623-1]
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGTCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGCACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAACCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATCATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTCTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTAATTTATAACAAATTAAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CGGGTTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTACCTCAAATTTTAGAAAAACTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGAAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA

Domains

Predicted by InterProScan.

• Type II secretion system (T2SS), protein F (T2SSF) (227-347)

• Type II secretion system (T2SS), protein F (T2SSF) (27-146)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGB	Staphylococcus aureus MW2	99.438	100	0.994
comGB	Staphylococcus aureus N315	99.438	100	0.994