Detailed information NTG1051863

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: ACE1EH_RS08095
• Genome accession: NZ_CP169535
• Coordinates: 1610724..1611503 (+)
• Length: 259 a.a.
• NCBI ID: WP_003154263.1
• Uniprot ID: I2C545
• Organism: Bacillus velezensis strain HJ-16
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1605724..1616503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACE1EH_RS08075 (ACE1EH_08075)	trmFO	1606411..1607718 (+)	1308	WP_012117550.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
ACE1EH_RS08080 (ACE1EH_08080)	xerC	1607788..1608705 (+)	918	WP_007409774.1	tyrosine recombinase XerC	-
ACE1EH_RS08085 (ACE1EH_08085)	hslV	1608721..1609266 (+)	546	WP_003154267.1	ATP-dependent protease subunit HslV	-
ACE1EH_RS08090 (ACE1EH_08090)	hslU	1609283..1610686 (+)	1404	WP_007611413.1	HslU--HslV peptidase ATPase subunit	-
ACE1EH_RS08095 (ACE1EH_08095)	codY	1610724..1611503 (+)	780	WP_003154263.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
ACE1EH_RS08100 (ACE1EH_08100)	flgB	1611857..1612246 (+)	390	WP_003154260.1	flagellar basal body rod protein FlgB	-
ACE1EH_RS08105 (ACE1EH_08105)	flgC	1612246..1612698 (+)	453	WP_007409776.1	flagellar basal body rod protein FlgC	-
ACE1EH_RS08110 (ACE1EH_08110)	fliE	1612709..1613029 (+)	321	WP_007409777.1	flagellar hook-basal body complex protein FliE	-
ACE1EH_RS08115 (ACE1EH_08115)	fliF	1613072..1614682 (+)	1611	WP_375005370.1	flagellar basal-body MS-ring/collar protein FliF	-
ACE1EH_RS08120 (ACE1EH_08120)	fliG	1614695..1615711 (+)	1017	WP_003154256.1	flagellar motor switch protein FliG	-
ACE1EH_RS08125 (ACE1EH_08125)	fliH	1615704..1616459 (+)	756	WP_375005371.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29056.24 Da
• Isoelectric Point: 4.6017

>NTDB_id=1051863 ACE1EH_RS08095 WP_003154263.1 1610724..1611503(+) (codY) [Bacillus velezensis strain HJ-16]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTRNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1051863 ACE1EH_RS08095 WP_003154263.1 1610724..1611503(+) (codY) [Bacillus velezensis strain HJ-16]
ATGGCTTTACTACAAAAAACACGAATTATTAACAGCATGCTGCAGGCTGCGGCAGGCAAACCCGTAAACTTTAAAGAAAT
GGCTGAAACGCTTCGTGACGTCATTGATTCTAATATTTTCGTCGTCAGCCGCAGAGGAAAGCTTTTGGGCTACTCTATTA
ATCAGCAGATTGAAAATGACCGCATGAAAAAAATGCTTGAAGACCGCCAGTTCCCGGAAGAGTACACGAGAAATCTGTTC
AATGTTCCGGAGACGTCTTCAAACCTTGATATCAACAGCGAATACACGGCGTTTCCTGTAGAAAACAGAGACCTGTTCCA
AGCGGGCTTAACAACGATCGTGCCGATCATCGGCGGAGGAGAGAGACTGGGCACGCTCATTCTGTCCCGTCTGCAGGATC
AATTTGAAGATGATGATCTCATTCTTGCTGAATACGGAGCAACCGTTGTAGGAATGGAGATTTTAAGAGAAAAAGCGGAA
GAAATCGAAGAAGAGGCGCGAAGCAAAGCGGTTGTTCAAATGGCGATCAGTTCTCTGTCTTACAGTGAACTTGAAGCGAT
TGAGCATATCTTTGAAGAGCTTGACGGAAACGAAGGCTTGCTTGTGGCAAGTAAGATTGCGGACCGTGTCGGCATTACGC
GTTCAGTAATCGTTAACGCGCTGAGAAAGCTGGAAAGCGCAGGCGTCATTGAATCCAGATCACTGGGAATGAAGGGGACG
TACATTAAAGTTCTGAACAACAAATTCCTTATTGAATTGGAAAACCTTAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY GAF-like domain (CodY) (3-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: I2C545

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	99.228	100	0.992
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.843	98.456	0.471