Detailed information NTG1051647

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: ACEX67_RS07970
• Genome accession: NZ_CP169520
• Coordinates: 1607595..1608374 (+)
• Length: 259 a.a.
• NCBI ID: WP_003154263.1
• Uniprot ID: I2C545
• Organism: Bacillus velezensis strain CX-H3
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1602595..1613374

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEX67_RS07950 (ACEX67_07950)	trmFO	1603282..1604589 (+)	1308	WP_003154273.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
ACEX67_RS07955 (ACEX67_07955)	xerC	1604659..1605576 (+)	918	WP_043867088.1	tyrosine recombinase XerC	-
ACEX67_RS07960 (ACEX67_07960)	hslV	1605592..1606137 (+)	546	WP_003154267.1	ATP-dependent protease subunit HslV	-
ACEX67_RS07965 (ACEX67_07965)	hslU	1606154..1607557 (+)	1404	WP_014305002.1	HslU--HslV peptidase ATPase subunit	-
ACEX67_RS07970 (ACEX67_07970)	codY	1607595..1608374 (+)	780	WP_003154263.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
ACEX67_RS07975 (ACEX67_07975)	flgB	1608729..1609118 (+)	390	WP_003154260.1	flagellar basal body rod protein FlgB	-
ACEX67_RS07980 (ACEX67_07980)	flgC	1609118..1609570 (+)	453	WP_003154259.1	flagellar basal body rod protein FlgC	-
ACEX67_RS07985 (ACEX67_07985)	fliE	1609581..1609901 (+)	321	WP_007409777.1	flagellar hook-basal body complex protein FliE	-
ACEX67_RS07990 (ACEX67_07990)	fliF	1609944..1611554 (+)	1611	WP_003154257.1	flagellar basal-body MS-ring/collar protein FliF	-
ACEX67_RS07995 (ACEX67_07995)	fliG	1611567..1612583 (+)	1017	WP_003154256.1	flagellar motor switch protein FliG	-
ACEX67_RS08000 (ACEX67_08000)	fliH	1612576..1613331 (+)	756	WP_057080704.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29056.24 Da
• Isoelectric Point: 4.6017

>NTDB_id=1051647 ACEX67_RS07970 WP_003154263.1 1607595..1608374(+) (codY) [Bacillus velezensis strain CX-H3]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTRNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1051647 ACEX67_RS07970 WP_003154263.1 1607595..1608374(+) (codY) [Bacillus velezensis strain CX-H3]
ATGGCTTTACTACAAAAAACACGAATTATTAACAGCATGCTGCAGGCTGCGGCAGGCAAACCCGTAAACTTTAAAGAAAT
GGCTGAAACGCTTCGTGACGTCATTGATTCTAATATTTTCGTCGTCAGCCGCAGAGGAAAGCTTTTGGGCTACTCTATTA
ATCAGCAGATTGAAAATGACCGCATGAAAAAAATGCTTGAAGACCGCCAGTTCCCGGAAGAGTACACGAGAAATCTGTTC
AATGTTCCGGAGACGTCTTCAAACCTTGATATCAACAGCGAATACACGGCGTTTCCTGTGGAAAACAGAGACCTGTTCCA
AGCGGGCTTAACAACGATCGTGCCGATCATCGGCGGAGGAGAGAGACTGGGCACGCTGATTCTGTCCCGTCTGCAGGATC
AATTTGAAGATGATGATCTCATTCTTGCTGAATACGGAGCAACCGTTGTAGGAATGGAGATTTTAAGAGAAAAAGCGGAA
GAAATCGAAGAAGAGGCGCGAAGCAAAGCGGTTGTTCAAATGGCGATCAGTTCTCTGTCTTACAGTGAACTTGAAGCGAT
TGAGCATATCTTTGAAGAGCTTGACGGAAATGAAGGCTTGCTTGTGGCAAGTAAGATTGCGGACCGTGTCGGCATTACGC
GTTCAGTAATCGTTAACGCGCTGAGAAAGCTGGAAAGCGCAGGCGTCATTGAATCCAGATCATTGGGAATGAAGGGGACG
TACATTAAAGTTCTGAACAACAAATTCCTTATTGAATTGGAAAACCTTAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY GAF-like domain (CodY) (3-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: I2C545

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	99.228	100	0.992
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.843	98.456	0.471