Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACEYZN_RS01580 | Genome accession | NZ_CP169375 |
| Coordinates | 341018..341443 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain H3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 336018..346443
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACEYZN_RS01570 (ACEYZN_01570) | pilY1 | 336672..340526 (+) | 3855 | WP_000768965.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACEYZN_RS01575 (ACEYZN_01575) | pilY2 | 340539..341021 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| ACEYZN_RS01580 (ACEYZN_01580) | pilE | 341018..341443 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ACEYZN_RS01585 (ACEYZN_01585) | rpsP | 341590..341841 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACEYZN_RS01590 (ACEYZN_01590) | rimM | 341861..342409 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACEYZN_RS01595 (ACEYZN_01595) | trmD | 342455..343195 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACEYZN_RS01600 (ACEYZN_01600) | rplS | 343403..343771 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACEYZN_RS01605 (ACEYZN_01605) | - | 343824..344765 (-) | 942 | WP_085943440.1 | triacylglycerol lipase | - |
| ACEYZN_RS01610 (ACEYZN_01610) | - | 344880..345914 (-) | 1035 | WP_057093625.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=1051094 ACEYZN_RS01580 WP_000788342.1 341018..341443(+) (pilE) [Acinetobacter baumannii strain H3]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1051094 ACEYZN_RS01580 WP_000788342.1 341018..341443(+) (pilE) [Acinetobacter baumannii strain H3]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |