Detailed information NTG0105020

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: R8946_RS05280
• Genome accession: NZ_AP028374
• Coordinates: 1020374..1021105 (+)
• Length: 243 a.a.
• NCBI ID: WP_041160133.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BCH-10881
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1015374..1026105

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8946_RS05250 (B10881_10290)	rpsF	1015516..1015893 (+)	378	WP_002853062.1	30S ribosomal protein S6	-
R8946_RS05255 (B10881_10300)	ssb	1015902..1016453 (+)	552	WP_002865738.1	single-stranded DNA-binding protein	-
R8946_RS05260 (B10881_10310)	rpsR	1016464..1016724 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
R8946_RS05265 (B10881_10320)	lon	1016785..1019160 (-)	2376	WP_002868636.1	endopeptidase La	-
R8946_RS05270 (B10881_10330)	-	1019177..1019824 (-)	648	WP_002852961.1	outer membrane protein assembly factor BamD	-
R8946_RS05275 (B10881_10340)	fliW	1019985..1020374 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
R8946_RS05280 (B10881_10350)	proC	1020374..1021105 (+)	732	WP_041160133.1	pyrroline-5-carboxylate reductase	Machinery gene
R8946_RS05285 (B10881_10360)	ctsT	1021102..1021404 (+)	303	WP_002853046.1	type II secretion system protein	Machinery gene
R8946_RS05290 (B10881_10370)	-	1021401..1022063 (+)	663	WP_002859149.1	hypothetical protein	-
R8946_RS05295 (B10881_10380)	-	1022060..1022512 (+)	453	WP_002859148.1	hypothetical protein	-
R8946_RS05300 (B10881_10390)	hemD	1022509..1023138 (-)	630	WP_002859147.1	uroporphyrinogen-III synthase	-
R8946_RS05305 (B10881_10400)	thiE	1023116..1023748 (-)	633	WP_002852670.1	thiamine phosphate synthase	-
R8946_RS05310 (B10881_10410)	thiD	1023738..1024550 (-)	813	WP_002867189.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
R8946_RS05315 (B10881_10420)	-	1024547..1025233 (-)	687	WP_002852847.1	endonuclease III domain-containing protein	-
R8946_RS05320 (B10881_10430)	-	1025230..1025991 (-)	762	WP_002852748.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26589.04 Da
• Isoelectric Point: 9.1644

>NTDB_id=105020 R8946_RS05280 WP_041160133.1 1020374..1021105(+) (proC) [Campylobacter jejuni strain BCH-10881]
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIKGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
STK

Nucleotide

• Length: 732 bp

>NTDB_id=105020 R8946_RS05280 WP_041160133.1 1020374..1021105(+) (proC) [Campylobacter jejuni strain BCH-10881]
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGGTTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAAAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCACTAAATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	98.765	100	0.988