Detailed information NTG1049731

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: ACETWW_RS08230
• Genome accession: NZ_CP169072
• Coordinates: 1634171..1634950 (+)
• Length: 259 a.a.
• NCBI ID: WP_003154263.1
• Uniprot ID: I2C545
• Organism: Bacillus velezensis strain T971
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1629171..1639950

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACETWW_RS08210 (ACETWW_08200)	trmFO	1629858..1631165 (+)	1308	WP_032871468.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
ACETWW_RS08215 (ACETWW_08205)	xerC	1631235..1632152 (+)	918	WP_007409774.1	tyrosine recombinase XerC	-
ACETWW_RS08220 (ACETWW_08210)	hslV	1632168..1632713 (+)	546	WP_003154267.1	ATP-dependent protease subunit HslV	-
ACETWW_RS08225 (ACETWW_08215)	hslU	1632730..1634133 (+)	1404	WP_007611413.1	HslU--HslV peptidase ATPase subunit	-
ACETWW_RS08230 (ACETWW_08220)	codY	1634171..1634950 (+)	780	WP_003154263.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
ACETWW_RS08235 (ACETWW_08225)	flgB	1635304..1635693 (+)	390	WP_251248458.1	flagellar basal body rod protein FlgB	-
ACETWW_RS08240 (ACETWW_08230)	flgC	1635693..1636145 (+)	453	WP_059367001.1	flagellar basal body rod protein FlgC	-
ACETWW_RS08245 (ACETWW_08235)	fliE	1636156..1636476 (+)	321	WP_007409777.1	flagellar hook-basal body complex protein FliE	-
ACETWW_RS08250 (ACETWW_08240)	fliF	1636519..1638129 (+)	1611	WP_251248457.1	flagellar basal-body MS-ring/collar protein FliF	-
ACETWW_RS08255 (ACETWW_08245)	fliG	1638142..1639158 (+)	1017	WP_003154256.1	flagellar motor switch protein FliG	-
ACETWW_RS08260 (ACETWW_08250)	fliH	1639151..1639906 (+)	756	WP_052827421.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29056.24 Da
• Isoelectric Point: 4.6017

>NTDB_id=1049731 ACETWW_RS08230 WP_003154263.1 1634171..1634950(+) (codY) [Bacillus velezensis strain T971]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTRNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1049731 ACETWW_RS08230 WP_003154263.1 1634171..1634950(+) (codY) [Bacillus velezensis strain T971]
ATGGCTTTACTACAAAAAACACGAATTATTAACAGCATGCTGCAGGCTGCGGCAGGCAAACCCGTAAACTTTAAAGAAAT
GGCTGAAACGCTTCGTGACGTCATTGATTCTAATATTTTCGTCGTCAGCCGCAGAGGAAAGCTTTTGGGCTACTCTATTA
ACCAGCAGATTGAAAATGACCGTATGAAAAAAATGCTTGAAGACCGCCAGTTCCCGGAAGAGTACACGAGAAATCTGTTC
AATGTTCCGGAGACGTCTTCAAACCTTGATATCAACAGCGAATACACGGCGTTTCCTGTGGAAAACAGAGACCTGTTCCA
AGCGGGCTTAACAACGATCGTGCCGATCATCGGCGGAGGAGAGAGACTGGGCACGCTCATTCTGTCCCGTCTGCAGGATC
AATTTGAAGATGATGATCTCATTCTTGCTGAATACGGAGCAACCGTTGTAGGAATGGAGATTTTAAGAGAAAAAGCGGAA
GAAATCGAAGAAGAGGCGCGAAGCAAAGCGGTTGTTCAAATGGCGATCAGTTCTCTGTCTTACAGTGAACTTGAAGCGAT
TGAGCATATCTTTGAAGAGCTTGACGGAAACGAAGGCTTGCTTGTGGCAAGTAAGATTGCGGACCGTGTCGGCATTACGC
GTTCAGTAATCGTTAACGCGCTGAGAAAGCTGGAAAGCGCAGGCGTCATTGAATCCAGATCACTGGGAATGAAGGGGACG
TACATTAAAGTTCTGAACAACAAATTCCTTATTGAATTGGAAAACCTTAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY GAF-like domain (CodY) (3-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: I2C545

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	99.228	100	0.992
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.843	98.456	0.471