Detailed information NTG0104785

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: NTHI723_RS08940
• Genome accession: NZ_CP007472
• Coordinates: 1820986..1822326 (+)
• Length: 446 a.a.
• NCBI ID: WP_044365034.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain 723
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1815986..1827326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NTHI723_RS08925 (NTHI723_01792)	lrp	1817041..1817520 (+)	480	WP_005653255.1	leucine-responsive transcriptional regulator Lrp	-
NTHI723_RS08930 (NTHI723_01793)	-	1817522..1820290 (+)	2769	WP_044365032.1	DNA translocase FtsK	-
NTHI723_RS08935 (NTHI723_01794)	lolA	1820308..1820925 (+)	618	WP_005661471.1	outer membrane lipoprotein chaperone LolA	-
NTHI723_RS08940 (NTHI723_01795)	rarA	1820986..1822326 (+)	1341	WP_044365034.1	replication-associated recombination protein A	Machinery gene
NTHI723_RS08945 (NTHI723_01796)	-	1822413..1823555 (-)	1143	WP_005687705.1	hypothetical protein	-
NTHI723_RS08950 (NTHI723_01797)	dcm	1823565..1824788 (-)	1224	WP_044365036.1	DNA (cytosine-5-)-methyltransferase	-
NTHI723_RS08955 (NTHI723_01798)	aroA	1825042..1826340 (-)	1299	WP_044365039.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
NTHI723_RS08960 (NTHI723_01799)	purU	1826340..1827176 (-)	837	WP_005661478.1	formyltetrahydrofolate deformylase	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50292.19 Da
• Isoelectric Point: 6.3312

>NTDB_id=104785 NTHI723_RS08940 WP_044365034.1 1820986..1822326(+) (rarA) [Haemophilus influenzae strain 723]
MSNLNFDFAENDFRPLAAKMRPTNLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADEMENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAIYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYSAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=104785 NTHI723_RS08940 WP_044365034.1 1820986..1822326(+) (rarA) [Haemophilus influenzae strain 723]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACAAATCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCTATCCAAGCTGGGCATATTCATTCTATGA
TTTTGTGGGGCCCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCAGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGAGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGATGAAATGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGCGAACGTCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGAGG
TTCTGCTCCAGACGCTGCACTGTATTGGTATGCAAGAATTTTAACGGCAGGTGGCGATCCTTTATATGTCGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTTGCATTGGCTGCATGGGATTGCTTT
ACTAGAGTGGGGGCTTATGAAGGGGAGCGTGCCATTGCCCAAGCCATTATTTATCTTGCGGTAGCTCCAAAAAGTAATGC
GATTTATACTGCATTTAACACTGCGAAACAGCAAGCGAAAGATTTGCCTGATTATGATGTTCCCCCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTTGGCTATAGTGCTGAATATCGTTATGCCCACGATGAACCTAACGCTTATGCAGCT
GGTGAAAATTATTTCCCGCCTGAATTAAAAGACACTCAATATTATTTTCCGACGAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGATTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.007	94.843	0.37