Detailed information NTG1047286

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB2Q37_RS07895
• Genome accession: NZ_CP168867
• Coordinates: 1564552..1566948 (-)
• Length: 798 a.a.
• NCBI ID: WP_046670687.1
• Uniprot ID: A0A9P2E8X8
• Organism: Listeria monocytogenes strain N22-2859
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1559552..1571948

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2Q37_RS07875 (AB2Q37_07870)	-	1560018..1560713 (-)	696	WP_003725979.1	ABC transporter ATP-binding protein	-
AB2Q37_RS07880 (AB2Q37_07875)	-	1560722..1562221 (-)	1500	WP_003725980.1	ABC transporter permease	-
AB2Q37_RS07885 (AB2Q37_07880)	pieR	1562388..1563074 (+)	687	WP_060586967.1	two component system response regulator PieR	-
AB2Q37_RS07890 (AB2Q37_07885)	pieS	1563071..1564510 (+)	1440	WP_003741021.1	two component system sensor histidine kinase PieS	-
AB2Q37_RS07895 (AB2Q37_07890)	recD2	1564552..1566948 (-)	2397	WP_046670687.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB2Q37_RS07900 (AB2Q37_07895)	-	1566976..1567614 (-)	639	WP_072572675.1	tetratricopeptide repeat protein	-
AB2Q37_RS07905 (AB2Q37_07900)	-	1567655..1568395 (-)	741	WP_003727411.1	alpha/beta hydrolase	-
AB2Q37_RS07910 (AB2Q37_07905)	mnmA	1568514..1569629 (-)	1116	WP_003727410.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB2Q37_RS07915 (AB2Q37_07910)	-	1569648..1570796 (-)	1149	WP_046670689.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90117.22 Da
• Isoelectric Point: 4.8081

>NTDB_id=1047286 AB2Q37_RS07895 WP_046670687.1 1564552..1566948(-) (recD2) [Listeria monocytogenes strain N22-2859]
MAEQESLALFNDTPEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAK
FGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKITAENIVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRE
NQGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDIKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQNILVAQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQ
TEYQEQFPQSEFLLALGELEERIGVHYGDSQRQALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKD
GATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFTKNSADRSFFHCTVNQIGD
VVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGDIKYRVHDKVLQLINQPEKNVFN
GDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGIERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITEIDPMIGMEGITPEQFMAG

Nucleotide

• Length: 2397 bp

>NTDB_id=1047286 AB2Q37_RS07895 WP_046670687.1 1564552..1566948(-) (recD2) [Listeria monocytogenes strain N22-2859]
ATGGCTGAACAAGAATCACTCGCTCTATTTAACGATACACCAGAAGAACTTTTCATGAAGGGCACGATGTTGTCCACCAT
TTTTTACAATGCCGAAAACCTCTTTTCTGTTGTACGAATATTGGTCAAAGAAACCAATGCGGATTGGGACGAAAAAGATA
TTATCGTAACCGGTTTTTTCCCAGCGCTTCACGAGCAAGAAGTATACACTTTCTACGGGAAAATGCAGGAACATGCTAAA
TTTGGTCAACAGTTTAAAGCAGACCGGTTTCGTAAGGAAATGCCACAATCACGAGCGGGCTTAATTAATTATCTATCCGG
TGAACTTTTTAAAGGCATTGGTAAAATCACTGCTGAAAATATTGTGGATACGATTGGCGACGATGCTATCACAAAAATTT
TATCCGATCCGAGCTTGCTAAATACAGTACCTAAGTTGCCATCTGGCGCGGCAGAAAGTTTGCTTGCTTCCCTTAGAGAA
AATCAAGGGTTGGAGCATGTGATGGTCGGATTAAACGAATATGGCTTTGGTCCGCAATTATCCATGAAAATTTTCCAGGC
CTATAAACAAAATGCGATTGAAGTGTTAGAGAATAATCCTTATAAATTGATTGAGGATATAAAAGGGATTGGTTTTCAGC
GTGCCGATGAGCTTGGACGGAAACTCGGTCTTGGCGGGAATCATCCAGAACGGCTTCGTGCTGGGATTTTATTTATGTTA
GATTCGGTTTGTATGCAACAAGGTCATGTATATATGGAGCAAGAGGTTCTGCTCGGAGAAGTAACTTATTTACTGGAAGA
AAGCGAAGGCATTCGTATTGACCAAAATATTTTAGTGGCTCAAGTAGAAAAATTAGCTGAGGAACAAAAGATTATTACGG
AAAATACACGTGTTTACATGCCATCACTCTATTATTCAGAGAGCGGCTTTGCATATCACGTGAAGCGAATGCTTAAACAA
ACAGAATACCAAGAACAATTTCCGCAATCCGAATTTTTACTAGCTCTAGGAGAATTAGAAGAACGGATTGGCGTTCACTA
CGGAGATTCGCAGCGACAGGCTTTAGAACAAGCTTTAATGTCTCCGATGCTCGTACTTACTGGTGGTCCCGGGACAGGGA
AAACAACAGTCATTAAAGGGATAGTGGAGCTTTATGCGGAACTAAATGGTGTGAGCCTTGATCCCCATGCTTACAAAGAT
GGAGCGACTTTCCCCGTTCTTCTTGCTGCTCCAACTGGCCGTGCCGCTAAACGGATGTCTGAGTCAACAGGGCTTCCTGC
GATGACCATTCACCGTTTACTTGGAATGAATGGTCAAGAACAAATGGATGATGATGCAGAAAGACTGATTGATGGACGAC
TATTGATTGTGGATGAGATGTCAATGGTAGATATTTGGCTTGCTAATCAATTATTCCGTGCTTTACCAGCGCACATGCAA
GTGGTACTTGTTGGCGACCAAGATCAGTTGCCTTCAGTCGGACCAGGTCAAGTACTCAAAGATATTCTGCAATCTGAACA
AATTCCAACTGTAGCTCTTTCAGATATTTACCGCCAAAAGGATGGTTCTTCCATTATCGAAATGGCGCATTATATAAAAG
AAGGCATGTTGCCAGCTGATTTCACCAAAAATAGCGCCGATCGCTCCTTTTTTCATTGCACGGTAAATCAAATTGGTGAT
GTAGTCGAACAAGTGGTAAAAAATGCAAAAAACAAAGGATTTCGAGCAAAAGACATCCAAGTTTTAGCACCAATGTATCG
TGGTCCTGCAGGCATTGATATTTTAAATAAAAAACTACAAGAAATTTTCAATCCAAATGATACAGGGCGTCGTAAAGAAG
TTCAATTTGGTGACATAAAGTATCGCGTGCATGACAAAGTACTGCAATTGATTAATCAACCAGAGAAAAATGTGTTTAAC
GGTGATATTGGTGAAATTGTGTCTATTATATACGCCAAAGAAAATACCGAAAAACAAGATCTGATTGTCGTTCAATTTGA
CCAAACAGAGGTTTCTTACTATAGGCAAGAATTTAATCAATTGACCCATGCTTATTGTTGTTCGATCCATAAAGCGCAGG
GAAGTGAATTTCCGATTGTGATTATGCCGATTGTCCGCAGTTACTACCGGATGTTACGGCGCGATTTATTATACACCGGA
GTAACGCGAAGTAAACAATTTCTCATTCTTTGCGGGGAAGAAGAAGCTTTTCGAATGGGGATAGAACGAATTGATGAAAA
TAAACGTAATACAACACTCTCTGAACGTTTAATGAGCGAAGATGTTTTATTAGAACAAATGACAAATAAACGAATTCTCA
CAGCTGAAAATATTACGGAAATTGATCCGATGATTGGAATGGAAGGGATTACTCCAGAACAATTTATGGCAGGATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-251)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

• AAA domain (AAA_30) (347-554)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.234	98.747	0.565