Detailed information NTG0104709

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: NTHIC486_RS05600
• Genome accession: NZ_CP007471
• Coordinates: 1146378..1147718 (+)
• Length: 446 a.a.
• NCBI ID: WP_005656929.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain C486
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1141378..1152718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NTHIC486_RS05585 (NTHIC486_01115)	lrp	1142433..1142912 (+)	480	WP_005653255.1	leucine-responsive transcriptional regulator Lrp	-
NTHIC486_RS05590 (NTHIC486_01116)	-	1142914..1145682 (+)	2769	WP_044345595.1	DNA translocase FtsK	-
NTHIC486_RS05595 (NTHIC486_01117)	lolA	1145700..1146317 (+)	618	WP_005656931.1	outer membrane lipoprotein chaperone LolA	-
NTHIC486_RS05600 (NTHIC486_01118)	rarA	1146378..1147718 (+)	1341	WP_005656929.1	replication-associated recombination protein A	Machinery gene
NTHIC486_RS05605 (NTHIC486_01119)	aroA	1147799..1149097 (-)	1299	WP_005656927.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
NTHIC486_RS05610 (NTHIC486_01120)	purU	1149097..1149933 (-)	837	WP_005656925.1	formyltetrahydrofolate deformylase	-
NTHIC486_RS05615 (NTHIC486_01121)	-	1150003..1150407 (-)	405	WP_005656923.1	H-NS family nucleoid-associated regulatory protein	-
NTHIC486_RS05620 (NTHIC486_01122)	-	1150850..1152370 (+)	1521	WP_005661480.1	Na+/H+ antiporter NhaC family protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50235.07 Da
• Isoelectric Point: 6.3316

>NTDB_id=104709 NTHIC486_RS05600 WP_005656929.1 1146378..1147718(+) (rarA) [Haemophilus influenzae strain C486]
MSNLNFDFAENDFRPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMAEETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGTEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=104709 NTHIC486_RS05600 WP_005656929.1 1146378..1147718(+) (rarA) [Haemophilus influenzae strain C486]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCAGCCAAGATGCGTCCAACGAGTCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCATTGCGAAAAGCTATCCAAGCTGGGCATATTCATTCTATGA
TTTTGTGGGGACCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCGGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGCATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCATATTGAAGATGGAA
CTGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTACTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGAAGAAACGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGAGAACGCCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGAGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCAAGAATTTTAACAGCGGGTGGAGACCCTTTATATGTTGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGAGCTATGCAAGTCGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGGGAGCGAGCCATCGCCCAAGCCATTATTTATCTTGCAGTAGCCCCAAAAAGTAATGC
GGTTTATACCGCATTTAACACTGCGAAACAGCAAGCGAAAGATTTACCTGATTACGATGTTCCACCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTCGGATATGGCACTGAATATCGTTATGCTCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGACACTCAATATTATTTTCCGACAAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGGTTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.243	94.843	0.372