Detailed information NTG0104671

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: R8950_RS05580
• Genome accession: NZ_AP028355
• Coordinates: 1075798..1076529 (+)
• Length: 243 a.a.
• NCBI ID: WP_002859150.1
• Uniprot ID: A0AB36G763
• Organism: Campylobacter jejuni strain BCH-10539
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1070798..1081529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8950_RS05550 (B10539_10950)	rpsF	1070944..1071321 (+)	378	WP_002853062.1	30S ribosomal protein S6	-
R8950_RS05555 (B10539_10960)	ssb	1071330..1071878 (+)	549	WP_002860190.1	single-stranded DNA-binding protein	-
R8950_RS05560 (B10539_10970)	rpsR	1071889..1072149 (+)	261	WP_002853032.1	30S ribosomal protein S18	-
R8950_RS05565 (B10539_10980)	lon	1072209..1074584 (-)	2376	WP_002853487.1	endopeptidase La	-
R8950_RS05570 (B10539_10990)	-	1074601..1075248 (-)	648	WP_011049880.1	outer membrane protein assembly factor BamD	-
R8950_RS05575 (B10539_11000)	fliW	1075409..1075798 (+)	390	WP_002852982.1	flagellar assembly protein FliW	-
R8950_RS05580 (B10539_11010)	proC	1075798..1076529 (+)	732	WP_002859150.1	pyrroline-5-carboxylate reductase	Machinery gene
R8950_RS05585 (B10539_11020)	ctsT	1076526..1076828 (+)	303	WP_002853046.1	type II secretion system protein	Machinery gene
R8950_RS05590 (B10539_11030)	-	1076825..1077487 (+)	663	WP_002858296.1	hypothetical protein	-
R8950_RS05595 (B10539_11040)	-	1077484..1077936 (+)	453	WP_002859148.1	hypothetical protein	-
R8950_RS05600 (B10539_11050)	hemD	1077933..1078562 (-)	630	WP_002859147.1	uroporphyrinogen-III synthase	-
R8950_RS05605 (B10539_11060)	thiE	1078540..1079172 (-)	633	WP_060809525.1	thiamine phosphate synthase	-
R8950_RS05610 (B10539_11070)	thiD	1079162..1079974 (-)	813	WP_002852691.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
R8950_RS05615 (B10539_11080)	-	1079971..1080657 (-)	687	WP_060809526.1	endonuclease III domain-containing protein	-
R8950_RS05620 (B10539_11090)	-	1080654..1081415 (-)	762	WP_002852748.1	ATP-binding protein	-

Sequence

Protein

• Length: 243 a.a.
• Molecular weight: 26559.95 Da
• Isoelectric Point: 8.5934

>NTDB_id=104671 R8950_RS05580 WP_002859150.1 1075798..1076529(+) (proC) [Campylobacter jejuni strain BCH-10539]
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSSALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide

• Length: 732 bp

>NTDB_id=104671 R8950_RS05580 WP_002859150.1 1075798..1076529(+) (proC) [Campylobacter jejuni strain BCH-10539]
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGGTTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAGTGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA

Domains

Predicted by InterproScan.

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (145-242)

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (4-85)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	99.588	100	0.996