Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   R8497_RS06585 Genome accession   NZ_AP028352
Coordinates   1279126..1279641 (-) Length   171 a.a.
NCBI ID   WP_041160206.1    Uniprot ID   A0A5Y8UQV7
Organism   Campylobacter jejuni strain BCH-10518     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1274126..1284641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8497_RS06570 (B10518_12900) - 1274219..1275961 (-) 1743 WP_317643987.1 flagellin A -
  R8497_RS06575 (B10518_12910) - 1276044..1277870 (-) 1827 WP_041160205.1 motility associated factor glycosyltransferase family protein -
  R8497_RS06580 (B10518_12920) - 1277867..1279126 (-) 1260 WP_100626176.1 DUF2920 family protein -
  R8497_RS06585 (B10518_12930) ctsG 1279126..1279641 (-) 516 WP_041160206.1 type II secretion system protein Machinery gene
  R8497_RS06590 (B10518_12940) tsaD 1279642..1280649 (-) 1008 WP_041160207.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  R8497_RS06595 (B10518_12950) - 1280646..1282040 (-) 1395 WP_100626175.1 M99 family carboxypeptidase catalytic domain-containing protein -
  R8497_RS06600 (B10518_12960) dxr 1282042..1283112 (-) 1071 WP_041160209.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  R8497_RS06605 (B10518_12970) cdsA 1283109..1283834 (-) 726 WP_100626174.1 phosphatidate cytidylyltransferase -
  R8497_RS06610 (B10518_12980) - 1283844..1284182 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18692.59 Da        Isoelectric Point: 6.4682

>NTDB_id=104652 R8497_RS06585 WP_041160206.1 1279126..1279641(-) (ctsG) [Campylobacter jejuni strain BCH-10518]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRIGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=104652 R8497_RS06585 WP_041160206.1 1279126..1279641(-) (ctsG) [Campylobacter jejuni strain BCH-10518]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCATAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y8UQV7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment