Detailed information NTG1046211

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB2Q87_RS07975
• Genome accession: NZ_CP168830
• Coordinates: 1579469..1581865 (-)
• Length: 798 a.a.
• NCBI ID: WP_068996038.1
• Uniprot ID: -
• Organism: Listeria monocytogenes strain N23-1083
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1574469..1586865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2Q87_RS07955 (AB2Q87_07950)	-	1574929..1575624 (-)	696	WP_003723691.1	ABC transporter ATP-binding protein	-
AB2Q87_RS07960 (AB2Q87_07955)	-	1575633..1577138 (-)	1506	WP_003723692.1	ABC transporter permease	-
AB2Q87_RS07965 (AB2Q87_07960)	pieR	1577305..1577991 (+)	687	WP_003723693.1	two component system response regulator PieR	-
AB2Q87_RS07970 (AB2Q87_07965)	pieS	1577988..1579427 (+)	1440	WP_010990146.1	two component system sensor histidine kinase PieS	-
AB2Q87_RS07975 (AB2Q87_07970)	recD2	1579469..1581865 (-)	2397	WP_068996038.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB2Q87_RS07980 (AB2Q87_07975)	-	1581893..1582531 (-)	639	WP_010990147.1	tetratricopeptide repeat protein	-
AB2Q87_RS07985 (AB2Q87_07980)	-	1582572..1583312 (-)	741	WP_003723697.1	alpha/beta hydrolase	-
AB2Q87_RS07990 (AB2Q87_07985)	mnmA	1583430..1584545 (-)	1116	WP_003723698.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB2Q87_RS07995 (AB2Q87_07990)	-	1584564..1585712 (-)	1149	WP_003723699.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90078.10 Da
• Isoelectric Point: 4.7810

>NTDB_id=1046211 AB2Q87_RS07975 WP_068996038.1 1579469..1581865(-) (recD2) [Listeria monocytogenes strain N23-1083]
MAEQESLALFDDTTEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAK
FGQQFKADRFHKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRE
NQGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDVKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEILLGEVTYLLEESEGIRIDQSILVAQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQ
TEYQEQFPQSEFLLALGELEERIGVHYGDSQRQALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKD
GATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFTKNSADRSFFHCTVNQIGD
VVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGDTKYRVHDKVLQLINQPEKNVFN
GDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGIERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITEIDPMIGMEGITPEQFMVG

Nucleotide

• Length: 2397 bp

>NTDB_id=1046211 AB2Q87_RS07975 WP_068996038.1 1579469..1581865(-) (recD2) [Listeria monocytogenes strain N23-1083]
ATGGCTGAACAAGAATCACTCGCCTTATTTGATGATACAACGGAAGAACTTTTCATGAAGGGCACGATGTTGTCTACCAT
TTTTTACAATGCCGAAAACCTCTTTTCTGTCGTACGAATATTGGTAAAAGAAACAAATGCGGATTGGGACGAAAAAGATA
TTATCGTAACTGGCTTTTTCCCAGCACTCCACGAACAAGAAGTCTACACTTTCTACGGAAAAATGCAGGAACATGCTAAA
TTTGGTCAACAATTCAAAGCAGACCGGTTTCATAAAGAAATGCCACAATCACGCGCTGGTTTAATTAATTATCTTTCTGG
AGAACTTTTTAAAGGAATTGGTAAAGTAACCGCTGAAAATATTGTGGATACGATTGGCGATGATGCTATTACGAAAATTT
TATCCGATCCGAGTTTGTTAAACACGGTACCTAAGTTGCCATCCGGTGCAGCGGAAAGTTTGCTTGCTTCTCTTAGAGAA
AATCAGGGATTAGAGCATGTGATGGTCGGTTTAAACGAATATGGCTTTGGCCCGCAATTATCCATGAAAATTTTCCAGGC
CTATAAACAAAATGCTATTGAAGTGTTAGAGAATAATCCTTATAAATTGATTGAGGACGTAAAAGGGATTGGTTTTCAGC
GTGCCGATGAGCTTGGACGGAAACTCGGTCTTGGCGGGAATCATCCAGAACGGCTTCGCGCAGGGATTTTATTTATGTTA
GATTCGGTTTGTATGCAACAAGGTCACGTATACATGGAGCAAGAGATTCTGCTTGGAGAAGTGACATATTTGCTAGAAGA
AAGTGAAGGCATTCGAATTGACCAAAGTATTTTAGTAGCTCAAGTAGAAAAATTGGCCGAGGAACAAAAGATTATTACGG
AAAACACACGCGTATACATGCCATCGCTCTATTATTCAGAGAGTGGCTTTGCATATCATGTGAAGCGAATGCTTAAACAA
ACAGAATACCAAGAACAATTTCCACAATCCGAATTTTTACTAGCTCTAGGAGAATTAGAAGAAAGGATTGGCGTTCATTA
CGGAGACTCACAACGACAGGCTTTAGAACAAGCTTTAATGTCTCCGATGCTCGTACTTACTGGTGGTCCTGGAACAGGGA
AAACAACGGTCATTAAAGGGATAGTGGAGCTGTATGCGGAACTAAATGGTGTGAGTCTTGATCCCCATGCTTACAAAGAT
GGAGCGACTTTCCCCGTTCTTCTTGCTGCTCCAACTGGTCGTGCCGCTAAACGGATGTCAGAGTCAACTGGACTTCCTGC
GATGACTATTCACCGTCTACTCGGAATGAATGGTCAAGAACAAATGGATGATGATGCAGAAAGACTGATTGATGGACGAC
TGTTGATTGTGGATGAGATGTCGATGGTTGATATTTGGCTTGCTAATCAATTATTCCGTGCTTTACCAGCGCACATGCAA
GTGGTACTCGTTGGCGACCAAGATCAGTTGCCTTCAGTCGGACCGGGTCAAGTACTCAAAGATATTCTGCAATCTGAACA
AATTCCAACTGTAGCTCTTTCAGATATTTATCGCCAAAAGGATGGTTCTTCCATTATCGAAATGGCGCATTATATAAAAG
AAGGCATGTTGCCAGCTGATTTCACCAAAAATAGCGCCGATCGCTCCTTTTTTCATTGCACGGTAAATCAAATTGGTGAT
GTGGTCGAACAAGTGGTAAAAAATGCAAAAAACAAAGGGTTTCGAGCAAAAGATATCCAAGTTTTAGCACCAATGTATCG
TGGTCCCGCAGGCATTGATATTTTAAATAAAAAACTACAAGAAATCTTCAATCCAAATGATACAGGGCGTCGTAAAGAAG
TTCAATTCGGTGACACAAAGTATCGCGTGCATGACAAAGTACTGCAATTGATTAATCAACCAGAGAAAAATGTGTTTAAC
GGTGATATCGGTGAAATTGTTTCTATAATCTACGCCAAAGAAAATACCGAAAAACAAGATCTGATTGTCGTTCAATTTGA
CCAAACAGAGGTTTCTTACTATAGGCAAGAATTTAATCAATTGACCCATGCTTATTGTTGTTCGATTCATAAAGCGCAGG
GAAGTGAATTTCCGATTGTGATTATGCCGATTGTCCGCAGTTACTACCGGATGTTACGTCGCGATTTACTCTACACTGGA
GTAACGCGGAGTAAACAATTTCTCATTCTTTGCGGGGAAGAAGAAGCTTTTCGAATGGGGATAGAACGAATTGATGAAAA
TAAGCGTAATACGACACTCTCTGAACGTTTAATGAGCGAAGATGTTTTATTAGAACAAATGACGAATAAACGAATTCTCA
CTGCTGAAAACATTACGGAAATTGATCCGATGATTGGAATGGAAGGGATTACTCCAGAACAGTTTATGGTAGGATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• AAA domain (AAA_30) (347-554)

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-251)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.36	98.747	0.566