Detailed information NTG0104602

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: NTHI477_RS00340
• Genome accession: NZ_CP007470
• Coordinates: 78951..80291 (+)
• Length: 446 a.a.
• NCBI ID: WP_044329805.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain 477
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 73951..85291

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NTHI477_RS00325 (NTHI477_00065)	lrp	75006..75485 (+)	480	WP_005653255.1	leucine-responsive transcriptional regulator Lrp	-
NTHI477_RS00330 (NTHI477_00066)	-	75487..78255 (+)	2769	WP_044329797.1	DNA translocase FtsK	-
NTHI477_RS00335 (NTHI477_00067)	lolA	78273..78890 (+)	618	WP_005661471.1	outer membrane lipoprotein chaperone LolA	-
NTHI477_RS00340 (NTHI477_00068)	rarA	78951..80291 (+)	1341	WP_044329805.1	replication-associated recombination protein A	Machinery gene
NTHI477_RS00345 (NTHI477_00069)	aroA	80372..81670 (-)	1299	WP_005656927.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
NTHI477_RS00350 (NTHI477_00070)	purU	81670..82506 (-)	837	WP_005656925.1	formyltetrahydrofolate deformylase	-
NTHI477_RS00355 (NTHI477_00071)	-	82576..82980 (-)	405	WP_005647241.1	H-NS family nucleoid-associated regulatory protein	-
NTHI477_RS00360 (NTHI477_00072)	-	83423..84943 (+)	1521	WP_005671547.1	Na+/H+ antiporter NhaC family protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50262.10 Da
• Isoelectric Point: 6.3316

>NTDB_id=104602 NTHI477_RS00340 WP_044329805.1 78951..80291(+) (rarA) [Haemophilus influenzae strain 477]
MSNLNFDFAENDFRPLAAKMRPTNLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMAEETENGKKIDRTLLKEVL
GERQARFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGTEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=104602 NTHI477_RS00340 WP_044329805.1 78951..80291(+) (rarA) [Haemophilus influenzae strain 477]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGCCCACTGGCGGCCAAGATGCGTCCAACAAATCTAGAACA
ATATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAGCCACTGCGAAAAGCTATCCAAGCTGGGCATATTCATTCTATGA
TTTTGTGGGGCCCACCAGGTACGGGGAAAACAACCCTTGCAGAAATCATAGCACAACGTATTAATGCAGAAGTAGAGCGA
ATTTCTGCGGTGACGAGTGGTATCAAAGAAATTCGTGAAGCGATTGATCGTGCAAAACAAAATCGTCTTGCGGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGCCAGCAAGATGCATTTTTACCGCACATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAATCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGCTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGTGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTACTTGCCGAATATGTTAATGGGGATGCACGATTAGCCTTGAATT
GCCTCGAATTAATGGTGGATATGGCAGAAGAAACGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGAGAACGCCAAGCGAGATTTGATAAACAAGGTGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTTCGAGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCAAGAATTTTAACAGCGGGTGGAGACCCTTTATATGTTGCGCGCCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGAGCTATGCAAGTCGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGGGAGCGAGCCATCGCCCAAGCCATTATTTATCTTGCAGTAGCCCCAAAAAGTAATGC
GGTTTATACCGCATTTAACACTGCGAAACAGCAAGCGAAAGATTTACCTGATTACGATGTTCCACCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTCGGATATGGCACTGAATATCGTTATGCTCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGACACTCAATATTATTTTCCGACAAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGGTTACGTGAGCAAGATAAAAGTGCGGTGAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• AAA C-terminal domain (AAA_assoc_2) (188-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.243	94.843	0.372