Detailed information NTG0104591

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: R8561_RS05500
• Genome accession: NZ_AP028350
• Coordinates: 1065450..1066187 (+)
• Length: 245 a.a.
• NCBI ID: WP_002780246.1
• Uniprot ID: A0A5T1L8T6
• Organism: Campylobacter coli strain BCH-10420
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1060450..1071187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8561_RS05470 (B10420_10700)	rpsF	1060598..1060975 (+)	378	WP_002812868.1	30S ribosomal protein S6	-
R8561_RS05475 (B10420_10710)	-	1060984..1061532 (+)	549	WP_023890499.1	single-stranded DNA-binding protein	-
R8561_RS05480 (B10420_10720)	rpsR	1061543..1061803 (+)	261	WP_002777087.1	30S ribosomal protein S18	-
R8561_RS05485 (B10420_10730)	lon	1061859..1064234 (-)	2376	WP_002780250.1	endopeptidase La	-
R8561_RS05490 (B10420_10740)	-	1064250..1064897 (-)	648	WP_002780248.1	outer membrane protein assembly factor BamD	-
R8561_RS05495 (B10420_10750)	fliW	1065061..1065450 (+)	390	WP_002777093.1	flagellar assembly protein FliW	-
R8561_RS05500 (B10420_10760)	proC	1065450..1066187 (+)	738	WP_002780246.1	pyrroline-5-carboxylate reductase	Machinery gene
R8561_RS05505 (B10420_10770)	-	1066184..1066489 (+)	306	WP_002790525.1	hypothetical protein	-
R8561_RS05510 (B10420_10780)	-	1066482..1067150 (+)	669	WP_002790524.1	hypothetical protein	-
R8561_RS05515 (B10420_10790)	-	1067147..1067599 (+)	453	WP_002777117.1	hypothetical protein	-
R8561_RS05520 (B10420_10800)	-	1067592..1068221 (-)	630	WP_002783358.1	uroporphyrinogen-III synthase	-
R8561_RS05525 (B10420_10810)	thiE	1068199..1068831 (-)	633	WP_002783359.1	thiamine phosphate synthase	-
R8561_RS05530 (B10420_10820)	thiD	1068821..1069633 (-)	813	WP_002786353.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
R8561_RS05535 (B10420_10830)	-	1069633..1070316 (-)	684	WP_002791740.1	3-methyladenine DNA glycosylase	-
R8561_RS05540 (B10420_10840)	-	1070313..1071074 (-)	762	WP_025431509.1	ATP-binding protein	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26797.20 Da
• Isoelectric Point: 9.3032

>NTDB_id=104591 R8561_RS05500 WP_002780246.1 1065450..1066187(+) (proC) [Campylobacter coli strain BCH-10420]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=104591 R8561_RS05500 WP_002780246.1 1065450..1066187(+) (proC) [Campylobacter coli strain BCH-10420]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A5T1L8T6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792