Detailed information NTG1045728

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB2R05_RS07860
• Genome accession: NZ_CP168811
• Coordinates: 1556472..1558868 (-)
• Length: 798 a.a.
• NCBI ID: WP_012951641.1
• Uniprot ID: A0A9P3QQK2
• Organism: Listeria monocytogenes strain N24-0276
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1551472..1563868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2R05_RS07840 (AB2R05_07850)	-	1551932..1552627 (-)	696	WP_012951639.1	ABC transporter ATP-binding protein	-
AB2R05_RS07845 (AB2R05_07855)	-	1552636..1554141 (-)	1506	WP_012951640.1	ABC transporter permease	-
AB2R05_RS07850 (AB2R05_07860)	pieR	1554308..1554994 (+)	687	WP_003723693.1	two component system response regulator PieR	-
AB2R05_RS07855 (AB2R05_07865)	pieS	1554991..1556430 (+)	1440	WP_010990146.1	two component system sensor histidine kinase PieS	-
AB2R05_RS07860 (AB2R05_07870)	recD2	1556472..1558868 (-)	2397	WP_012951641.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB2R05_RS07865 (AB2R05_07875)	-	1558896..1559534 (-)	639	WP_010990147.1	tetratricopeptide repeat protein	-
AB2R05_RS07870 (AB2R05_07880)	-	1559575..1560315 (-)	741	WP_012951642.1	alpha/beta hydrolase	-
AB2R05_RS07875 (AB2R05_07885)	mnmA	1560433..1561548 (-)	1116	WP_003723698.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB2R05_RS07880 (AB2R05_07890)	-	1561567..1562715 (-)	1149	WP_010990149.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90065.15 Da
• Isoelectric Point: 4.7816

>NTDB_id=1045728 AB2R05_RS07860 WP_012951641.1 1556472..1558868(-) (recD2) [Listeria monocytogenes strain N24-0276]
MAEQESLALFDDTTEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAK
FGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRE
NQGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDVKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQSILVAQVEKLAEEQKIIAENTRVYMPSLYYSESGFAYHVKRMLKQ
TEYQEQFPQSEFLLALGELEERIGVHYGDSQRQALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKD
GATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSEQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFTKNSADRSFFHCTVNQIGD
VVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGDIKYRVHDKVLQLINQPEKNVFN
GDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGIERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITEIDPMIGMEGITPEQFMVG

Nucleotide

• Length: 2397 bp

>NTDB_id=1045728 AB2R05_RS07860 WP_012951641.1 1556472..1558868(-) (recD2) [Listeria monocytogenes strain N24-0276]
ATGGCTGAACAAGAATCACTCGCCTTATTTGATGATACAACGGAAGAACTTTTCATGAAGGGCACGATGTTGTCTACCAT
TTTTTACAATGCCGAAAACCTCTTTTCTGTCGTACGAATATTGGTAAAAGAAACAAATGCGGATTGGGACGAAAAAGATA
TTATCGTAACTGGCTTTTTCCCAGCACTCCACGAACAAGAAGTCTACACTTTCTACGGAAAAATGCAGGAACATGCTAAA
TTTGGTCAACAATTCAAAGCAGACCGGTTTCGTAAAGAAATGCCACAATCACGCGCTGGTTTAATTAATTATCTTTCTGG
AGAACTTTTTAAAGGAATTGGTAAAGTAACCGCTGAAAATATTGTGGATACGATTGGTGATGATGCTATTACGAAAATTT
TATCCGATCCGAGTTTGTTAAACACGGTACCTAAGTTGCCATCCGGTGCAGCGGAAAGTTTGCTTGCTTCCCTTAGAGAA
AATCAGGGATTAGAGCATGTGATGGTCGGTTTAAACGAATATGGCTTTGGCCCGCAATTATCCATGAAAATTTTCCAGGC
CTATAAACAAAATGCTATTGAAGTGTTAGAGAATAATCCTTATAAATTGATTGAGGACGTAAAAGGGATTGGTTTTCAGC
GTGCCGATGAGCTTGGACGGAAACTCGGTCTTGGCGGGAATCATCCAGAACGGCTTCGCGCAGGGATTTTATTTATGTTA
GATTCGGTTTGTATGCAACAAGGTCACGTATACATGGAGCAAGAGGTTCTGCTTGGAGAAGTGACATATTTGCTAGAAGA
AAGTGAAGGCATTCGAATTGACCAAAGTATTTTAGTAGCTCAAGTAGAAAAATTGGCCGAGGAACAAAAGATTATTGCGG
AAAACACACGCGTATACATGCCATCGCTCTATTATTCAGAGAGTGGCTTTGCATATCATGTGAAGCGAATGCTTAAACAA
ACAGAATACCAAGAACAATTTCCACAATCCGAATTTTTACTAGCTCTAGGAGAATTAGAAGAAAGGATTGGCGTTCATTA
CGGAGACTCACAACGACAGGCTTTAGAACAAGCTTTAATGTCTCCGATGCTCGTACTTACTGGTGGTCCTGGAACAGGGA
AAACAACGGTCATTAAAGGGATAGTGGAGCTGTATGCGGAACTAAATGGTGTGAGTCTTGATCCCCATGCTTACAAAGAT
GGAGCGACTTTCCCCGTTCTTCTTGCTGCTCCAACTGGTCGTGCCGCTAAACGGATGTCAGAGTCAACTGGACTTCCTGC
GATGACTATTCACCGTCTACTCGGAATGAATGGTCAAGAACAAATGGATGATGATGCAGAAAGACTGATTGATGGACGAC
TGTTGATTGTGGATGAGATGTCGATGGTTGATATTTGGCTTGCTAATCAATTATTCCGTGCTTTACCAGCGCACATGCAA
GTGGTACTCGTTGGCGACCAAGATCAGTTGCCTTCAGTCGGACCGGGTCAAGTACTCAAAGATATTCTGCAATCTGAACA
AATTCCAACTGTAGCTCTTTCAGATATTTATCGCCAAAAGGATGGTTCTTCCATTATCGAAATGGCGCATTATATAAAAG
AAGGCATGTTGCCAGCTGATTTCACCAAAAATAGCGCCGATCGCTCCTTTTTTCATTGCACGGTAAATCAAATTGGTGAT
GTGGTCGAACAAGTGGTAAAAAATGCAAAAAACAAAGGGTTTCGAGCAAAAGATATCCAAGTTTTAGCACCAATGTATCG
TGGTCCCGCAGGCATTGATATTTTAAATAAAAAACTACAAGAAATCTTCAATCCAAATGATACAGGGCGTCGTAAAGAAG
TTCAATTCGGTGACATAAAGTATCGCGTGCATGACAAAGTACTGCAATTGATTAATCAACCAGAGAAAAATGTGTTTAAC
GGTGATATCGGTGAAATTGTTTCTATAATCTACGCCAAAGAAAATACCGAAAAACAAGATCTGATTGTCGTTCAATTTGA
CCAAACAGAGGTTTCTTACTATAGGCAAGAATTTAATCAATTGACCCATGCTTATTGTTGTTCGATTCATAAAGCGCAGG
GAAGTGAATTTCCGATTGTGATTATGCCGATTGTCCGCAGTTACTACCGGATGTTACGTCGCGATTTACTCTACACTGGA
GTAACGCGGAGTAAACAATTTCTCATTCTTTGCGGGGAAGAAGAAGCTTTTCGAATGGGGATAGAACGAATTGATGAAAA
TAAGCGTAATACGACACTCTCTGAACGTTTAATGAGCGAAGATGTTTTATTAGAACAAATGACGAATAAACGAATTCTCA
CTGCTGAAAACATTACGGAAATTGATCCGATGATTGGAATGGAAGGGATTACTCCAGAACAGTTTATGGTAGGATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-251)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

• AAA domain (AAA_30) (347-554)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.36	98.747	0.566