Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | R8965_RS08075 | Genome accession | NZ_AP028338 |
| Coordinates | 1514178..1514774 (-) | Length | 198 a.a. |
| NCBI ID | WP_002779314.1 | Uniprot ID | A0A0Q2JMT7 |
| Organism | Campylobacter coli strain BCH-10307 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1509178..1519774
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8965_RS08050 (B10307_15890) | - | 1509340..1510104 (+) | 765 | WP_317727890.1 | TIGR02757 family protein | - |
| R8965_RS08055 (B10307_15900) | - | 1510107..1510871 (+) | 765 | WP_317727891.1 | TSUP family transporter | - |
| R8965_RS08060 (B10307_15910) | ctsF | 1510868..1512043 (-) | 1176 | WP_002781160.1 | type II secretion system F family protein | Machinery gene |
| R8965_RS08065 (B10307_15920) | ctsE | 1512030..1513592 (-) | 1563 | WP_002779312.1 | GspE/PulE family protein | Machinery gene |
| R8965_RS08070 (B10307_15930) | - | 1513585..1514181 (-) | 597 | WP_002779313.1 | CDC27 family protein | - |
| R8965_RS08075 (B10307_15940) | ctsP | 1514178..1514774 (-) | 597 | WP_002779314.1 | ATP-binding protein | Machinery gene |
| R8965_RS08080 (B10307_15950) | ctsD | 1514767..1516185 (-) | 1419 | WP_002779315.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| R8965_RS08085 (B10307_15960) | ctsR | 1516163..1516474 (-) | 312 | WP_002779316.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 23633.42 Da Isoelectric Point: 9.1569
>NTDB_id=104421 R8965_RS08075 WP_002779314.1 1514178..1514774(-) (ctsP) [Campylobacter coli strain BCH-10307]
MNNIIAFRQECFDQINALLKNKALILLWGKSGSGKSVLLQRLALYHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGM
YSPNVLELIRIYSDEMSFVLSSHKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK
MNNIIAFRQECFDQINALLKNKALILLWGKSGSGKSVLLQRLALYHNEDFTNEIFTDEKDFHHFIQDKKRKIIILDEVGM
YSPNVLELIRIYSDEMSFVLSSHKKINLFEEEYFKSRFSAIFWLQKPDINELSNYIKMKFNQDFPQKSLKFLMKIYQGNL
RYLDKILQSFCELNTYLNNKKSQDYILRLSALEQGFLK
Nucleotide
Download Length: 597 bp
>NTDB_id=104421 R8965_RS08075 WP_002779314.1 1514178..1514774(-) (ctsP) [Campylobacter coli strain BCH-10307]
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTGATCAAATCAATGCCTTATTAAAAAATAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGCTATATCATAATGAAGATTTTACCAATGAAA
TTTTTACAGATGAAAAAGATTTTCATCATTTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAGTCCTAATGTATTAGAACTAATTCGGATTTATAGCGATGAAATGAGTTTTGTGCTTAGCTCGCATAAAAAAATCAA
TCTTTTTGAAGAGGAGTATTTTAAAAGTCGTTTTAGTGCTATTTTTTGGCTTCAAAAACCTGATATAAATGAATTAAGCA
ATTATATCAAAATGAAATTTAATCAAGACTTTCCCCAAAAATCTTTAAAATTTCTTATGAAAATTTATCAAGGAAATTTA
AGGTATTTAGACAAGATACTTCAAAGTTTTTGCGAATTAAACACCTATTTAAACAATAAAAAAAGTCAAGATTATATTTT
AAGACTAAGCGCATTAGAACAGGGATTTTTAAAATGA
ATGAATAATATAATTGCTTTTAGACAAGAATGTTTTGATCAAATCAATGCCTTATTAAAAAATAAAGCTTTGATTTTACT
TTGGGGTAAAAGCGGTAGTGGGAAAAGTGTTTTATTGCAAAGACTTGCGCTATATCATAATGAAGATTTTACCAATGAAA
TTTTTACAGATGAAAAAGATTTTCATCATTTTATACAAGATAAAAAACGAAAAATTATCATACTAGATGAAGTGGGGATG
TATAGTCCTAATGTATTAGAACTAATTCGGATTTATAGCGATGAAATGAGTTTTGTGCTTAGCTCGCATAAAAAAATCAA
TCTTTTTGAAGAGGAGTATTTTAAAAGTCGTTTTAGTGCTATTTTTTGGCTTCAAAAACCTGATATAAATGAATTAAGCA
ATTATATCAAAATGAAATTTAATCAAGACTTTCCCCAAAAATCTTTAAAATTTCTTATGAAAATTTATCAAGGAAATTTA
AGGTATTTAGACAAGATACTTCAAAGTTTTTGCGAATTAAACACCTATTTAAACAATAAAAAAAGTCAAGATTATATTTT
AAGACTAAGCGCATTAGAACAGGGATTTTTAAAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
57.921 |
100 |
0.591 |