Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   ACD269_RS09195 Genome accession   NZ_CP168260
Coordinates   1785714..1786745 (-) Length   343 a.a.
NCBI ID   WP_050210654.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain FC2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1780714..1791745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACD269_RS09145 (ACD269_09145) - 1780861..1781622 (-) 762 WP_373380528.1 SDR family NAD(P)-dependent oxidoreductase -
  ACD269_RS09150 (ACD269_09150) ytpR 1781655..1782281 (-) 627 WP_000578309.1 YtpR family tRNA-binding protein -
  ACD269_RS09155 (ACD269_09155) - 1782297..1782614 (-) 318 WP_000615767.1 thioredoxin family protein -
  ACD269_RS09160 (ACD269_09160) - 1782611..1782910 (-) 300 WP_001013974.1 DUF4651 domain-containing protein -
  ACD269_RS09165 (ACD269_09165) - 1783108..1783170 (-) 63 WP_219300018.1 hypothetical protein -
  ACD269_RS09170 (ACD269_09170) - 1783195..1783386 (-) 192 WP_000291826.1 cell wall-binding protein -
  ACD269_RS09175 (ACD269_09175) - 1783547..1784221 (-) 675 WP_000725719.1 hypothetical protein -
  ACD269_RS09180 (ACD269_09180) - 1784226..1784672 (-) 447 WP_000776596.1 LytTR family DNA-binding domain-containing protein -
  ACD269_RS09185 (ACD269_09185) - 1784786..1785289 (-) 504 WP_000800945.1 phosphatase PAP2 family protein -
  ACD269_RS09190 (ACD269_09190) - 1785286..1785648 (-) 363 WP_000078805.1 DUF2200 domain-containing protein -
  ACD269_RS09195 (ACD269_09195) rcrQ 1785714..1786745 (-) 1032 WP_050210654.1 ABC transporter ATP-binding protein Regulator
  ACD269_RS09200 (ACD269_09200) rcrP 1786752..1787573 (-) 822 WP_000601682.1 ABC transporter permease Regulator
  ACD269_RS09205 (ACD269_09205) - 1787590..1788061 (-) 472 Protein_1801 MarR family winged helix-turn-helix transcriptional regulator -
  ACD269_RS09210 (ACD269_09210) - 1788185..1788901 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ACD269_RS09215 (ACD269_09215) ply 1789782..1791197 (-) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  ACD269_RS09220 (ACD269_09220) - 1791208..1791618 (-) 411 WP_000595758.1 hypothetical protein -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 37948.14 Da        Isoelectric Point: 4.4764

>NTDB_id=1043516 ACD269_RS09195 WP_050210654.1 1785714..1786745(-) (rcrQ) [Streptococcus pneumoniae strain FC2]
MGFLLMGALFIVLPRTMVSAKRINQVLDLHSSIQNPVQVQLTDENFKGQVEFKDVTFRYAANSEAVIEHVSFKAETGQTV
AFIGSTGSGKSTLVNLIPRFYDVSAGEILVDGVNVQDYDFSATAHAGQKVAIVGPTGTGKTTIVNLLMKFYEIDKGSIHI
DGVDTKAMTRSEVHDAFSMVLQDTWLFEGTIRDNLIYNQIGISDERMMEASKAVGIHHFIMTLPDGYDTILDDTVTLSVG
QKQLLTIARTLLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGNYEE
LMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=1043516 ACD269_RS09195 WP_050210654.1 1785714..1786745(-) (rcrQ) [Streptococcus pneumoniae strain FC2]
ATGGGCTTCCTTCTCATGGGAGCACTCTTCATCGTTCTTCCCCGAACTATGGTCTCTGCTAAGCGGATTAATCAAGTTTT
AGATTTGCATTCTTCTATCCAAAACCCTGTTCAAGTACAGCTGACTGATGAAAACTTCAAAGGTCAGGTCGAGTTTAAGG
ATGTGACCTTCCGCTATGCGGCAAATTCGGAGGCAGTTATTGAACATGTTAGCTTTAAAGCAGAAACTGGTCAAACAGTG
GCCTTTATTGGGTCAACAGGTTCTGGTAAATCAACTCTGGTCAATCTGATTCCACGTTTCTACGACGTGTCAGCAGGAGA
AATTCTGGTGGACGGTGTCAATGTTCAAGACTATGACTTCTCTGCGACAGCTCATGCTGGTCAAAAGGTTGCCATTGTTG
GGCCGACTGGGACTGGTAAGACAACCATTGTCAATCTTTTGATGAAATTCTATGAGATTGATAAGGGAAGTATTCACATT
GATGGTGTGGATACCAAGGCTATGACGCGTTCAGAAGTGCATGATGCCTTTTCAATGGTCTTGCAGGATACCTGGCTCTT
TGAAGGAACTATTCGAGACAATCTCATCTATAATCAAATAGGGATTAGTGATGAACGAATGATGGAAGCTAGTAAGGCTG
TGGGAATTCACCACTTTATTATGACCTTGCCAGATGGCTATGATACCATCTTGGATGACACCGTGACCTTGTCTGTAGGA
CAAAAACAACTATTGACTATTGCTCGTACCCTTCTTAAGGATGCACCGCTTTTGATTTTGGATGAGGCGACTTCTTCTGT
TGACACACGGACAGAGGAATTGATCCAAAAAGCCATGGACCGTTTGATGGAAGGACGCACATCCTTTGTCATTGCCCACC
GCTTGTCAACCATCCGAAATGCAGACTTGATCTTGGTCATGAAAGATGGAAATATCATCGAGCAAGGCAACTATGAGGAA
CTGATGGCGCAAGGTGGCTTCTACGCTGACTTGTACAATAGTCAATTTACAGAAGATGAAGCAGAAGAATAA

Domains


Predicted by InterproScan.

(120-265)

(68-118)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

80.357

65.306

0.525

  rcrP Streptococcus mutans UA159

37.572

100

0.379


Multiple sequence alignment