Detailed information NTG0104331

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: Q433_RS06030
• Genome accession: NZ_CP007409
• Coordinates: 1165017..1165934 (+)
• Length: 305 a.a.
• NCBI ID: WP_003232954.1
• Uniprot ID: A0A9W5LHY5
• Organism: Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1160017..1170934

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q433_RS06015 (Q433_06445)	trpS	1160597..1161589 (-)	993	WP_003245134.1	tryptophan--tRNA ligase	-
Q433_RS06020 (Q433_06455)	oppA	1162333..1163970 (+)	1638	WP_003232957.1	oligopeptide ABC transporter substrate-binding protein OppA	-
Q433_RS06025 (Q433_06460)	oppB	1164078..1165013 (+)	936	WP_003245554.1	oligopeptide ABC transporter permease OppB	-
Q433_RS06030 (Q433_06465)	amiD	1165017..1165934 (+)	918	WP_003232954.1	oligopeptide ABC transporter permease OppC	Regulator
Q433_RS06035 (Q433_06470)	oppD	1165939..1167015 (+)	1077	WP_014906294.1	oligopeptide ABC transporter ATP-binding protein OppD	-
Q433_RS06040 (Q433_06475)	oppF	1167017..1167934 (+)	918	WP_003245567.1	oligopeptide ABC transporter ATP-binding protein OppF	-
Q433_RS06045 (Q433_06480)	yjbB	1168041..1169258 (+)	1218	WP_010886478.1	MFS transporter	-
Q433_RS06050 (Q433_06485)	yjbC	1169422..1170000 (+)	579	WP_003244921.1	GNAT family N-acetyltransferase	-
Q433_RS06055 (Q433_06490)	spx	1170181..1170576 (+)	396	WP_003245483.1	transcriptional regulator Spx	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33621.12 Da
• Isoelectric Point: 10.2873

>NTDB_id=104331 Q433_RS06030 WP_003232954.1 1165017..1165934(+) (amiD) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIIIVLIILMAIFAPMFSRYDYSTTNLLNADKPP
SKDHWFGTDDLGRDIFVRTWVGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMV
VLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLASQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEA
FLSYLGLGVPAPLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=104331 Q433_RS06030 WP_003232954.1 1165017..1165934(+) (amiD) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
ATGCAGAACATTCCAAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGGCGATGCAGAAAAAATAAGTAAAAAGAGCCT
TTCCCTCTGGAAAGATGCGATGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATCATTATCGTACTTATTA
TCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATGATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCGCCT
TCAAAAGATCACTGGTTCGGAACAGATGATCTTGGACGGGACATTTTCGTCCGTACATGGGTAGGGGCGCGAATCTCAAT
CTTTATCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAA
GAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTT
GTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGG
ACAAGTGCTGCAGCTGAAGAATCAGGAGTATGTGCTTGCTTCACAGACACTGGGTGCAAAAACATCCCGTCTTCTATTTA
AACATATCGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTCCTACTGCGATTTTTACAGAAGCC
TTTTTAAGCTATTTGGGACTTGGTGTTCCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGCATT
GACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCATTACAATGTTTGGTTTTAACGTTGTCGGCGACG
GATTAAGAGACGCATTGGATCCTAAGTTACGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-79)

3D structure

• AlphaFold DB: A0A9W5LHY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	35.922	100	0.364
amiD	Streptococcus thermophilus LMD-9	35.922	100	0.364