Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8918_RS05305 | Genome accession | NZ_AP028332 |
| Coordinates | 1017969..1018271 (+) | Length | 100 a.a. |
| NCBI ID | WP_317725950.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain BCH-10155 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1012969..1023271
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8918_RS05280 (B10155_10300) | rpsR | 1013334..1013594 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8918_RS05285 (B10155_10310) | lon | 1013654..1016029 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| R8918_RS05290 (B10155_10320) | - | 1016046..1016693 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| R8918_RS05295 (B10155_10330) | fliW | 1016852..1017241 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8918_RS05300 (B10155_10340) | proC | 1017241..1017972 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8918_RS05305 (B10155_10350) | ctsT | 1017969..1018271 (+) | 303 | WP_317725950.1 | hypothetical protein | Machinery gene |
| R8918_RS05310 (B10155_10360) | - | 1018268..1018930 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| R8918_RS05315 (B10155_10370) | - | 1018927..1019379 (+) | 453 | WP_002874062.1 | hypothetical protein | - |
| R8918_RS05320 (B10155_10380) | hemD | 1019376..1020005 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8918_RS05325 (B10155_10390) | thiE | 1019983..1020615 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| R8918_RS05330 (B10155_10400) | thiD | 1020605..1021417 (-) | 813 | WP_032586361.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8918_RS05335 (B10155_10410) | - | 1021414..1022100 (-) | 687 | WP_032586318.1 | endonuclease III domain-containing protein | - |
| R8918_RS05340 (B10155_10420) | - | 1022097..1022858 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12148.24 Da Isoelectric Point: 6.2957
>NTDB_id=104331 R8918_RS05305 WP_317725950.1 1017969..1018271(+) (ctsT) [Campylobacter jejuni strain BCH-10155]
MKKAFILIESISAITIVSLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIVSLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104331 R8918_RS05305 WP_317725950.1 1017969..1018271(+) (ctsT) [Campylobacter jejuni strain BCH-10155]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCGTATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCGTATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |