Detailed information NTG1042424

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB9L17_RS17310
• Genome accession: NZ_CP168124
• Coordinates: 3346247..3348679 (-)
• Length: 810 a.a.
• NCBI ID: WP_375199534.1
• Uniprot ID: -
• Organism: Bacillus sp. RS11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3341247..3353679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9L17_RS17290 (AB9L17_17295)	-	3342136..3342309 (-)	174	WP_223553596.1	CorA family divalent cation transporter	-
AB9L17_RS17295 (AB9L17_17300)	hpaB	3342458..3343894 (-)	1437	WP_223553594.1	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	-
AB9L17_RS17300 (AB9L17_17305)	-	3344242..3344430 (+)	189	WP_068983705.1	hypothetical protein	-
AB9L17_RS17305 (AB9L17_17310)	-	3344490..3346214 (-)	1725	WP_375199533.1	polysaccharide deacetylase family protein	-
AB9L17_RS17310 (AB9L17_17315)	recD2	3346247..3348679 (-)	2433	WP_375199534.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB9L17_RS17315 (AB9L17_17320)	-	3348854..3349372 (+)	519	WP_375199535.1	hypothetical protein	-
AB9L17_RS17320 (AB9L17_17325)	hisA	3349510..3350277 (+)	768	WP_068983708.1	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	-
AB9L17_RS17325 (AB9L17_17330)	-	3350274..3350561 (+)	288	WP_223553588.1	hypothetical protein	-
AB9L17_RS17330 (AB9L17_17335)	-	3351146..3351886 (+)	741	WP_068983711.1	GTP pyrophosphokinase family protein	-
AB9L17_RS17335 (AB9L17_17340)	-	3351946..3352605 (-)	660	WP_068983712.1	lipopolysaccharide assembly protein LapB	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 90888.12 Da
• Isoelectric Point: 4.8382

>NTDB_id=1042424 AB9L17_RS17310 WP_375199534.1 3346247..3348679(-) (recD2) [Bacillus sp. RS11]
MAENLDLFELNKFFILGRPIVSIFHNAQNMYSIVRVKIQETNLQYEDKEIIVVGYFPPLQMDEQYRFTGIMKQHPKYGVQ
FQIETFTKEVPATEQGIIHYLSSDLFVGIGKKTAETIVEKLGANALRLILEDPNALDAVPRLSAEKKEVIHRTIEQNLGL
ERVMIQLNEWGFGPQLGMKIYQTYRTEAVELLTENPYRLIEDVEGVGFFRADELGAKLGITGNHPDRIKAAILHTLNTAA
LSDGHVYLDAEHVLPLVKDILEQSQREEIPFETISKACIELREESKICGEETRLYLPSLYFSEVGIASKILALIERNNKA
EHFSKDEIRKAIGETEEMLNVTYAETQANAIEQALNSAVMILTGGPGTGKTTVVRGVVEVYAKLHGLSLNPKEYAQKEEP
FPIILCAPTGRAAKRLSESTELPAMTIHRLLGFTGQEKEEETEREVTGKLIIVDEMSMVDTWLAHQLLKSLHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASKQIPTVELTEVYRQAEGSTIIELAHQIKRGQITNDLTVKTTDRSFIKASSDQVASVVTQ
VVKSAVAKGQEIRNIQVLAPMYKGPAGIDNLNKMIQELINPNDTGTRKELVFGDVTYRIKDKVLQLVNQPESNVFNGDMG
EVISIIKAKETIEKQDLLVVSFDGIEVTYQRSDLNQLTLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRRNLLYTGITRA
KNFLILCGESDVLADGLQRTDDLQRFTSLRARLNPMNIAEEVAEDETIPLKDDLQKEKPSIDSKLTVETEPYIHPLIGMD
GISPYDYLDE

Nucleotide

• Length: 2433 bp

>NTDB_id=1042424 AB9L17_RS17310 WP_375199534.1 3346247..3348679(-) (recD2) [Bacillus sp. RS11]
ATGGCAGAGAATCTTGATTTATTTGAACTAAATAAATTTTTTATACTCGGACGTCCAATCGTCTCTATCTTTCATAATGC
ACAAAATATGTATTCGATAGTTCGTGTGAAAATTCAAGAGACCAACTTACAGTATGAGGATAAGGAAATAATTGTTGTTG
GATATTTTCCGCCGTTACAAATGGATGAACAATATCGTTTTACAGGTATAATGAAACAACATCCAAAATATGGTGTTCAA
TTTCAAATTGAGACGTTTACAAAAGAAGTGCCGGCAACAGAGCAAGGGATTATTCATTACTTATCGAGTGATTTGTTTGT
TGGGATAGGAAAAAAAACTGCTGAAACAATCGTAGAGAAACTCGGGGCGAATGCGTTACGTCTTATTTTAGAGGATCCAA
ATGCGCTTGATGCTGTACCTCGACTATCTGCTGAAAAAAAAGAGGTTATCCATCGTACAATTGAACAAAATCTAGGCTTA
GAACGAGTGATGATTCAACTTAATGAATGGGGTTTCGGACCACAGCTCGGCATGAAAATTTACCAAACATATCGAACAGA
GGCAGTTGAATTATTAACTGAAAATCCATACCGCCTTATTGAAGATGTAGAGGGTGTGGGTTTCTTTCGTGCCGACGAGC
TAGGTGCAAAATTAGGGATTACTGGCAATCATCCAGACCGTATTAAAGCGGCGATTTTACATACTCTAAATACAGCAGCT
TTATCGGACGGGCATGTGTATTTAGATGCAGAACATGTTTTACCGCTAGTAAAAGATATTCTTGAGCAAAGCCAACGAGA
AGAAATTCCTTTTGAGACCATTTCTAAAGCTTGCATCGAATTGCGTGAGGAAAGTAAAATTTGTGGGGAAGAGACGAGAT
TATATTTACCATCTCTATATTTCTCAGAAGTCGGAATTGCATCAAAAATATTAGCTTTAATCGAACGTAACAATAAGGCT
GAACATTTTAGCAAAGACGAAATACGTAAAGCGATTGGCGAAACAGAAGAAATGCTCAATGTCACATATGCTGAAACACA
AGCGAATGCTATTGAGCAAGCTTTAAACTCAGCTGTTATGATTTTAACTGGTGGTCCTGGTACTGGTAAAACAACTGTTG
TTCGGGGTGTAGTAGAAGTGTATGCAAAGTTACATGGACTATCATTAAACCCGAAGGAATACGCACAAAAAGAAGAGCCA
TTTCCGATTATTTTATGTGCTCCAACAGGACGTGCTGCCAAGCGTTTATCGGAATCAACAGAACTTCCAGCAATGACAAT
TCATCGACTGCTAGGCTTTACTGGTCAGGAGAAAGAGGAAGAAACTGAACGTGAAGTTACAGGGAAACTCATTATTGTAG
ATGAAATGTCGATGGTCGATACTTGGCTCGCGCATCAATTATTAAAATCCTTGCATGAGGATGTGCAAGTTGTATTTGTT
GGTGATCAGGATCAGCTCCCACCAGTAGGTCCAGGGCAGGTATTAAAGGACTTGTTAGCTTCCAAGCAAATACCTACTGT
GGAATTAACAGAGGTTTATCGACAAGCAGAGGGCTCAACAATTATTGAACTTGCTCATCAAATTAAACGTGGTCAGATCA
CTAATGATTTAACTGTAAAAACCACTGACCGTTCATTTATTAAAGCCTCCTCAGATCAAGTAGCAAGCGTTGTTACACAG
GTTGTGAAAAGTGCGGTTGCGAAAGGTCAAGAAATTCGTAATATCCAAGTGTTAGCACCAATGTACAAAGGTCCAGCAGG
AATTGACAATTTAAATAAAATGATTCAGGAGCTAATTAATCCAAACGATACTGGTACTAGAAAAGAGCTTGTCTTTGGTG
ATGTCACATATCGCATAAAGGATAAAGTCTTACAACTTGTCAATCAACCTGAAAGCAATGTTTTTAATGGTGATATGGGT
GAAGTCATCAGTATTATCAAGGCGAAGGAAACAATTGAGAAACAAGATTTGCTTGTTGTGTCATTCGATGGTATAGAAGT
AACTTATCAGCGTAGTGATCTCAATCAATTGACACTTGCTTATTGTTGCTCTATTCATAAATCGCAAGGCTCTGAGTTCC
AAACAGTTATTATGCCAGTTGTACGAGGCTATTCTAAAATGTTGCGTCGTAATTTATTATATACAGGTATTACGCGTGCA
AAAAATTTCTTGATTTTATGTGGTGAGTCAGATGTGCTAGCAGATGGCTTACAACGTACGGATGATTTACAGCGCTTTAC
GTCCTTACGTGCAAGACTCAATCCAATGAATATAGCAGAGGAAGTTGCGGAAGATGAAACGATTCCTTTGAAAGACGATT
TACAGAAAGAAAAACCATCCATTGACAGTAAACTAACGGTCGAAACGGAACCATATATCCATCCATTAATTGGAATGGAT
GGTATCTCGCCGTATGATTATTTAGATGAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-247)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-727)

• AAA domain (AAA_30) (343-550)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-660)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	53.535	97.778	0.523