Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ACDZ04_RS07920 | Genome accession | NZ_CP168017 |
| Coordinates | 1641668..1641967 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain sa230502_barcode25 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1636668..1646967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDZ04_RS07895 (ACDZ04_07895) | gcvPA | 1637880..1639226 (-) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| ACDZ04_RS07900 (ACDZ04_07900) | gcvT | 1639246..1640337 (-) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACDZ04_RS07905 (ACDZ04_07905) | - | 1640496..1641020 (-) | 525 | WP_001015125.1 | shikimate kinase | - |
| ACDZ04_RS07910 (ACDZ04_07910) | - | 1641010..1641156 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACDZ04_RS07915 (ACDZ04_07915) | comGF | 1641253..1641750 (-) | 498 | WP_001794055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACDZ04_RS07920 (ACDZ04_07920) | comGE | 1641668..1641967 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| ACDZ04_RS07925 (ACDZ04_07925) | comGD | 1641954..1642400 (-) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACDZ04_RS07930 (ACDZ04_07930) | comGC | 1642378..1642689 (-) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACDZ04_RS07935 (ACDZ04_07935) | comGB | 1642703..1643773 (-) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACDZ04_RS07940 (ACDZ04_07940) | comGA | 1643745..1644719 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACDZ04_RS07945 (ACDZ04_07945) | - | 1644771..1645394 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ACDZ04_RS07950 (ACDZ04_07950) | - | 1645391..1645720 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACDZ04_RS07955 (ACDZ04_07955) | - | 1645720..1646706 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| ACDZ04_RS07960 (ACDZ04_07960) | - | 1646703..1646906 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1041283 ACDZ04_RS07920 WP_000844413.1 1641668..1641967(-) (comGE) [Staphylococcus aureus strain sa230502_barcode25]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1041283 ACDZ04_RS07920 WP_000844413.1 1641668..1641967(-) (comGE) [Staphylococcus aureus strain sa230502_barcode25]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |