Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   R8695_RS13275 Genome accession   NZ_AP028156
Coordinates   2865966..2867804 (-) Length   612 a.a.
NCBI ID   WP_118509250.1    Uniprot ID   A0A844GJH8
Organism   Blautia luti strain JCM 17040     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2860966..2872804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8695_RS13260 (Blut17040_25930) - 2861039..2861848 (-) 810 WP_118509348.1 class I SAM-dependent DNA methyltransferase -
  R8695_RS13265 (Blut17040_25940) - 2862111..2863235 (-) 1125 WP_154780810.1 hypothetical protein -
  R8695_RS13270 (Blut17040_25950) - 2863592..2865649 (-) 2058 WP_118509251.1 HelD family protein -
  R8695_RS13275 (Blut17040_25960) rcrQ 2865966..2867804 (-) 1839 WP_118509250.1 ABC transporter ATP-binding protein Regulator
  R8695_RS13280 (Blut17040_25970) - 2867801..2869963 (-) 2163 WP_154780809.1 ABC transporter ATP-binding protein -
  R8695_RS13285 (Blut17040_25980) - 2870103..2870570 (-) 468 WP_154780808.1 MarR family winged helix-turn-helix transcriptional regulator -
  R8695_RS13290 (Blut17040_25990) - 2870804..2871688 (-) 885 WP_154780807.1 LysR family transcriptional regulator -

Sequence

Protein


Download         Length: 612 a.a.        Molecular weight: 68800.44 Da        Isoelectric Point: 7.1878

>NTDB_id=104122 R8695_RS13275 WP_118509250.1 2865966..2867804(-) (rcrQ) [Blautia luti strain JCM 17040]
MSEQRRRGPMGGHGRMMSGEKAKDFKGSMAKLFRYMGRYKFRFILMFIFAVAGTVFSIVGPKILGKATTELFNGLVAKVN
GTGEIDFGKIGMILLWTLGLYVLSACFSFVQGFVMSGISNDVTYNLRKDISKKINRLPLNYYESRTNGEILSRITNDVDT
LQMSLNQSLTQLITSVTTLIGVFIMMLSINVWMTLAALLILPVSMFIIQTVMKHSQKYFQDQQSYLGKVNGQIEENFGGH
NVVRVFNKENDVVEEFEKDNQKLYESAWKSQFFSGMMMPIMQFVGNLGYVMVALLGGVFVIKKSIEVGDIQSFFQYIRNF
TQPIQQIAQVTNLLQSSAAASERVFEFLEEPEESQNEKNPVDINTLTGDVQFEHVKFGYNPDKIIINDFSADVKDGQKIA
IVGPTGAGKTTMVKLLMRFYDLNGGSIKVDGYDIKDFNRSSLREMFGMVLQDTWLFSGTIMENIRYGRLDATDEEVIAAA
KAAHVHNFIMQQPGGYDMVLDEETSNISQGQKQLLTIARAILANNKILILDEATSSVDTRTEVRIQKAMDNLMKGRTSFV
IAHRLSTIKDADLILVMKDGDIIEQGNHKELLAKKGFYADLYNSQFENKASA

Nucleotide


Download         Length: 1839 bp        

>NTDB_id=104122 R8695_RS13275 WP_118509250.1 2865966..2867804(-) (rcrQ) [Blautia luti strain JCM 17040]
ATGAGCGAACAGAGAAGAAGAGGTCCTATGGGAGGACATGGACGTATGATGTCCGGCGAAAAGGCAAAAGACTTCAAGGG
CTCCATGGCTAAGCTTTTCCGTTATATGGGACGATATAAATTCCGCTTTATACTGATGTTTATCTTTGCAGTAGCGGGAA
CTGTGTTTAGTATTGTAGGGCCTAAGATTTTAGGTAAGGCGACCACAGAGCTGTTTAACGGCCTGGTTGCCAAGGTAAAC
GGAACCGGTGAAATTGACTTCGGAAAGATCGGGATGATCCTGTTATGGACACTTGGATTATATGTGTTAAGTGCATGCTT
TTCCTTTGTACAGGGATTTGTAATGTCCGGGATCTCCAATGATGTTACCTATAATCTGAGAAAAGATATTTCAAAGAAAA
TCAACAGACTGCCTCTGAATTATTATGAGAGCAGAACAAACGGAGAGATCCTCTCCCGTATCACCAATGATGTGGACACT
CTGCAGATGAGTCTGAACCAGAGTCTGACGCAGCTGATCACATCAGTGACAACTCTGATCGGTGTATTTATTATGATGCT
TTCCATTAACGTGTGGATGACTTTGGCAGCACTTCTGATCCTGCCGGTTTCCATGTTCATCATCCAGACTGTCATGAAGC
ATTCCCAGAAATACTTCCAGGATCAGCAGAGCTATCTGGGTAAAGTAAACGGTCAGATCGAAGAAAACTTCGGTGGTCAT
AATGTGGTCCGGGTTTTCAACAAAGAGAATGATGTAGTAGAAGAATTTGAGAAAGACAATCAGAAGCTTTATGAATCTGC
ATGGAAATCTCAGTTCTTCTCAGGAATGATGATGCCGATCATGCAGTTTGTAGGTAACCTTGGATATGTAATGGTAGCTC
TCTTAGGCGGCGTGTTTGTAATCAAAAAAAGTATTGAAGTCGGTGATATCCAGTCCTTCTTCCAGTACATCCGTAACTTT
ACACAGCCAATCCAGCAGATCGCACAGGTTACAAACCTGTTACAGTCCTCAGCAGCAGCTTCCGAACGAGTATTTGAATT
CCTGGAGGAGCCGGAAGAGAGCCAGAATGAAAAGAATCCTGTAGATATTAATACTCTTACAGGAGATGTACAGTTTGAAC
ATGTAAAATTCGGTTACAATCCGGATAAGATCATTATCAATGACTTCTCAGCAGATGTGAAGGATGGCCAGAAGATTGCC
ATTGTAGGTCCCACAGGTGCAGGAAAGACAACTATGGTGAAACTGCTTATGAGATTCTATGATCTCAATGGCGGAAGTAT
TAAGGTAGATGGTTACGACATCAAAGACTTTAACAGAAGCAGTCTGAGAGAGATGTTTGGAATGGTGCTTCAGGATACCT
GGCTGTTCTCAGGAACCATTATGGAAAATATCCGTTACGGACGTCTGGATGCTACAGATGAAGAGGTGATCGCAGCAGCA
AAAGCAGCCCATGTGCACAACTTTATCATGCAGCAGCCGGGCGGCTATGACATGGTTCTGGATGAAGAAACCAGTAATAT
TTCCCAGGGACAGAAACAGCTTCTCACTATTGCCAGGGCAATCCTTGCCAATAATAAGATCCTGATCCTGGATGAGGCAA
CCTCCTCTGTAGATACCAGAACCGAAGTGCGTATCCAGAAAGCCATGGACAATCTGATGAAGGGCAGAACAAGCTTTGTA
ATTGCACACAGACTTTCTACCATCAAGGATGCAGATCTGATCCTGGTTATGAAAGACGGTGACATTATCGAGCAGGGAAA
TCATAAGGAACTGCTTGCGAAGAAAGGCTTTTATGCTGATCTGTATAACAGCCAGTTTGAGAATAAGGCGAGTGCATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(387-535)

ABC transporter transmembrane region (ABC_membrane)

(43-323)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A844GJH8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

51.443

96.242

0.495

Multiple sequence alignment