Detailed information NTG1040950

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: KJP51_RS13830
• Genome accession: NZ_OX419576
• Coordinates: 2664323..2665588 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis isolate NRS6105
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2659323..2670588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP51_RS13810 (NRS6105_13700)	yrrB	2660694..2661314 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
KJP51_RS13815 (NRS6105_13705)	mnmA	2661400..2662515 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
KJP51_RS13820 (NRS6105_13710)	iscSA	2662546..2663685 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
KJP51_RS13825 (NRS6105_13715)	cymR	2663704..2664120 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
KJP51_RS13830 (NRS6105_13720)	rarA	2664323..2665588 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
KJP51_RS13835 (NRS6105_13725)	tcdA	2665630..2666394 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
KJP51_RS13845 (NRS6105_13735)	aspS	2666730..2668508 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
KJP51_RS13850 (NRS6105_13740)	hisS	2668522..2669796 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
KJP51_RS13855 (NRS6105_13745)	yrzK	2670178..2670348 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=1040950 KJP51_RS13830 WP_004398500.1 2664323..2665588(+) (rarA) [Bacillus subtilis isolate NRS6105]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=1040950 KJP51_RS13830 WP_004398500.1 2664323..2665588(+) (rarA) [Bacillus subtilis isolate NRS6105]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1