Detailed information NTG1039360

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACDI99_RS06590
• Genome accession: NZ_CP167783
• Coordinates: 1390555..1391190 (+)
• Length: 211 a.a.
• NCBI ID: WP_005025578.1
• Uniprot ID: A0A062BXX8
• Organism: Acinetobacter radioresistens strain E3263934
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1385555..1396190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACDI99_RS06555 (ACDI99_06555)	kdsB	1386017..1386778 (+)	762	WP_005025565.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACDI99_RS06560 (ACDI99_06560)	-	1386796..1387779 (+)	984	WP_005025569.1	DNA polymerase III subunit delta' C-terminal domain-containing protein	-
ACDI99_RS06565 (ACDI99_06565)	-	1387798..1388139 (+)	342	WP_005014707.1	PilZ domain-containing protein	-
ACDI99_RS06570 (ACDI99_06570)	-	1388183..1388956 (+)	774	WP_005025571.1	TatD family hydrolase	-
ACDI99_RS06575 (ACDI99_06575)	-	1388996..1389604 (+)	609	WP_005025573.1	TetR/AcrR family transcriptional regulator	-
ACDI99_RS06580 (ACDI99_06580)	-	1389619..1390182 (+)	564	WP_005025574.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ACDI99_RS06585 (ACDI99_06585)	xcpV	1390172..1390558 (+)	387	WP_005025576.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACDI99_RS06590 (ACDI99_06590)	xcpW	1390555..1391190 (+)	636	WP_005025578.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACDI99_RS06595 (ACDI99_06595)	gspK	1391213..1392157 (+)	945	WP_005025579.1	type II secretion system minor pseudopilin GspK	-
ACDI99_RS06600 (ACDI99_06600)	-	1392254..1392850 (+)	597	WP_005025581.1	6-carboxytetrahydropterin synthase	-
ACDI99_RS06605 (ACDI99_06605)	ung	1392895..1393608 (+)	714	WP_005025584.1	uracil-DNA glycosylase	-
ACDI99_RS06610 (ACDI99_06610)	-	1393605..1394729 (+)	1125	WP_005025586.1	enoyl-CoA hydratase/isomerase family protein	-
ACDI99_RS06615 (ACDI99_06615)	tadA	1394733..1395224 (+)	492	WP_005014690.1	tRNA adenosine(34) deaminase TadA	-
ACDI99_RS06620 (ACDI99_06620)	-	1395307..1395741 (+)	435	WP_005014689.1	SRPBCC family protein	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 24116.49 Da
• Isoelectric Point: 5.3446

>NTDB_id=1039360 ACDI99_RS06590 WP_005025578.1 1390555..1391190(+) (xcpW) [Acinetobacter radioresistens strain E3263934]
MKYKWGFTLVELLVAIAIFAALSALGWKVFDYLIKVKERNSIHEQNLARLQEAYQQILRDSLQLIPLTANNGGELRPALE
LNDQHFIFSKAGVTDPLGQGLGPYERIEYQYSSADQKLYRLKYQNLNTSTAIQPQSSVLLDQVEQYRISVLNPAELNRWP
EGVLDPASQSEQLKILPRGFKINLTINGTEYEWIYSLLNTDDLKEKTINPS

Nucleotide

• Length: 636 bp

>NTDB_id=1039360 ACDI99_RS06590 WP_005025578.1 1390555..1391190(+) (xcpW) [Acinetobacter radioresistens strain E3263934]
ATGAAATATAAATGGGGTTTTACTCTTGTGGAGCTGTTGGTCGCAATTGCGATTTTTGCAGCACTCTCTGCGCTGGGTTG
GAAGGTTTTTGATTATCTGATCAAAGTAAAAGAACGAAATAGTATACATGAGCAAAATCTTGCCCGGTTACAGGAAGCTT
ATCAGCAAATCTTACGTGACAGCCTGCAACTGATTCCATTAACTGCAAATAATGGAGGAGAGTTGCGTCCTGCACTTGAA
TTAAACGATCAGCATTTTATTTTTAGTAAAGCTGGTGTAACTGATCCTTTGGGCCAAGGGCTGGGGCCTTATGAGCGGAT
CGAATATCAATACAGTAGTGCAGATCAGAAACTGTACCGGTTAAAATATCAAAACCTGAATACTTCAACTGCTATTCAGC
CCCAGTCAAGTGTGCTTCTTGATCAGGTCGAGCAATACCGGATTAGCGTCTTAAATCCGGCTGAACTGAACAGATGGCCT
GAAGGCGTATTAGATCCTGCTTCCCAATCAGAACAGCTTAAAATTCTACCGCGCGGTTTTAAAATCAATCTGACCATAAA
TGGAACTGAATACGAATGGATTTACAGCCTTTTAAATACAGATGATTTAAAAGAAAAAACAATAAATCCATCTTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (59-190)

• Prokaryotic N-terminal methylation motif (N_methyl) (6-25)

3D structure

• AlphaFold DB: A0A062BXX8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	65.657	93.839	0.616