Detailed information NTG1038329

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ACB089_RS07185
• Genome accession: NZ_CP167122
• Coordinates: 1426589..1429021 (+)
• Length: 810 a.a.
• NCBI ID: WP_374965831.1
• Uniprot ID: -
• Organism: Lysinibacillus sp. RS10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1421589..1434021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB089_RS07155 (ACB089_07150)	mnmA	1422149..1423273 (+)	1125	WP_374965825.1	tRNA 2-thiouridine(34) synthase MnmA	-
ACB089_RS07160 (ACB089_07155)	-	1423358..1424017 (+)	660	WP_374965826.1	tetratricopeptide repeat protein	-
ACB089_RS07165 (ACB089_07160)	-	1424078..1424818 (-)	741	WP_374965827.1	GTP pyrophosphokinase family protein	-
ACB089_RS07170 (ACB089_07165)	-	1424982..1425269 (-)	288	WP_374965828.1	hypothetical protein	-
ACB089_RS07175 (ACB089_07170)	hisA	1425266..1426033 (-)	768	WP_374965829.1	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase	-
ACB089_RS07180 (ACB089_07175)	-	1426277..1426432 (-)	156	WP_374965830.1	hypothetical protein	-
ACB089_RS07185 (ACB089_07180)	recD2	1426589..1429021 (+)	2433	WP_374965831.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ACB089_RS07190 (ACB089_07185)	-	1429054..1430769 (+)	1716	WP_374965832.1	polysaccharide deacetylase family protein	-
ACB089_RS07195 (ACB089_07190)	-	1430829..1431017 (-)	189	WP_368635844.1	hypothetical protein	-
ACB089_RS07200 (ACB089_07195)	hpaB	1431364..1432800 (+)	1437	WP_374965833.1	4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	-
ACB089_RS07205 (ACB089_07200)	-	1433125..1433277 (+)	153	WP_374965834.1	CorA family divalent cation transporter	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 90899.17 Da
• Isoelectric Point: 4.8668

>NTDB_id=1038329 ACB089_RS07185 WP_374965831.1 1426589..1429021(+) (recD2) [Lysinibacillus sp. RS10]
MAENLDLFELNKFFILGRPIVSIFHNAQNMYSIVRVKIQETNLQYEDKEIIVVGYFPPLQMDEQYRFTGLLKQHPKYGVQ
FQIEMFTKEVPATEQGIVHYLSSDLFVGIGKKTAETIVEKLGANALRLILEDPNALDAVPRLSAEKKEVIHRTIEQNLGL
ERVMIQLNDWGFGPQLGMKIYQTYRTEAVELLTENPYRLIEDVEGVGFFRADELGAKLGITGNHPDRIKAAILHTLNTAA
LSDGHVYLDAEHVLPLVKDMLEQSQREEIPFETISKACIELREESKICGEETRLYLPSLYFSEVGIASKILALIERNNKA
EHFSKDEIRKAIGETEEMLHVTYAETQANAIEQALNSAVMILTGGPGTGKTTVVRGVVEVYAKLHGLSLNPKEYAQKEEP
FPIILCAPTGRAAKRLSESTELPAMTIHRLLGFTGQEKEEETEREVTGKLIIVDEMSMVDTWLAHQLLKSLHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASKQIPTVELTEVYRQAEGSTIIELAHQIKRGQITNDLTVKTSDRSFIKASSDQVASVVTQ
VVKSAVAKGQEIRNIQVLAPMYKGPAGIDNLNKMIQELINPNDTGTRKELVFGDVTYRIKDKVLQLVNQPESNVFNGDMG
EVISIIKAKETIEKQDLLVVSFDGIEVTYQRSDLNQLTLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRRNLLYTGITRA
KNFLILCGESDVLADGLQRTDDLQRFTSLRARLNPMNIAEEVAEDETIPLKDDLQKEKPSIDSKLTVETEPYIHPLIGMD
GISPYDYLDE

Nucleotide

• Length: 2433 bp

>NTDB_id=1038329 ACB089_RS07185 WP_374965831.1 1426589..1429021(+) (recD2) [Lysinibacillus sp. RS10]
ATGGCAGAGAATCTTGATTTATTTGAACTAAATAAATTTTTTATACTCGGACGTCCAATCGTCTCTATCTTTCATAATGC
ACAAAATATGTATTCGATAGTTCGTGTGAAAATTCAAGAGACCAACTTACAGTATGAGGATAAGGAAATAATTGTTGTTG
GATATTTCCCACCGTTACAAATGGATGAGCAATATCGTTTTACAGGTTTATTGAAACAACATCCAAAATATGGTGTGCAA
TTTCAAATTGAGATGTTTACGAAAGAAGTGCCAGCAACAGAGCAAGGAATTGTTCACTACTTATCGAGTGATTTGTTTGT
TGGAATCGGAAAAAAAACAGCTGAAACAATTGTAGAGAAACTAGGAGCAAATGCTTTACGTCTTATTTTAGAGGACCCTA
ACGCACTTGATGCTGTACCTCGTCTATCTGCTGAAAAAAAAGAGGTCATCCACCGTACGATTGAACAAAATCTTGGCTTA
GAACGAGTAATGATTCAACTAAATGACTGGGGTTTTGGACCACAGCTAGGTATGAAAATTTACCAAACATATCGAACAGA
GGCAGTTGAATTATTAACTGAAAATCCATACCGCCTTATTGAGGATGTAGAGGGTGTGGGTTTCTTTCGTGCCGACGAGC
TAGGTGCAAAATTAGGGATTACTGGCAATCATCCAGACCGTATTAAGGCGGCGATTTTACATACTCTAAATACAGCAGCT
TTATCGGATGGGCATGTGTATTTAGATGCAGAACATGTTTTACCGCTAGTAAAAGATATGCTTGAGCAAAGCCAACGAGA
AGAAATTCCCTTTGAGACTATTTCTAAAGCTTGTATCGAATTACGTGAGGAAAGTAAAATTTGTGGGGAAGAAACGAGAC
TATATTTACCATCTCTATATTTCTCAGAAGTCGGAATTGCATCAAAAATATTAGCTTTAATCGAACGTAACAATAAGGCT
GAACATTTTAGCAAAGACGAAATACGTAAAGCGATTGGTGAAACAGAAGAGATGCTTCATGTCACATATGCTGAAACACA
AGCGAATGCTATTGAGCAAGCTTTAAACTCAGCTGTTATGATTTTAACTGGTGGCCCCGGTACTGGTAAAACAACTGTTG
TTCGGGGTGTAGTAGAAGTGTATGCAAAGTTACACGGACTATCATTAAACCCGAAGGAATACGCACAAAAAGAAGAGCCA
TTTCCGATTATTTTATGTGCTCCAACAGGACGTGCTGCCAAGCGTTTATCGGAATCAACAGAACTTCCAGCAATGACAAT
TCATAGATTACTAGGATTTACCGGTCAGGAAAAAGAAGAAGAAACTGAACGTGAGGTTACAGGAAAACTCATTATTGTAG
ACGAAATGTCAATGGTCGATACTTGGCTTGCACATCAATTATTAAAATCCTTACATGAGGATGTACAAGTTGTATTTGTT
GGCGATCAGGATCAGCTCCCACCAGTAGGTCCAGGGCAGGTATTAAAGGATTTGTTAGCTTCCAAGCAAATACCTACTGT
GGAATTAACGGAAGTTTATCGACAAGCAGAGGGCTCAACAATTATTGAACTTGCTCATCAAATTAAACGTGGTCAGATCA
CTAATGATTTAACTGTAAAAACCTCTGACCGTTCATTTATTAAAGCCTCCTCAGATCAAGTAGCAAGCGTTGTTACACAG
GTTGTGAAAAGTGCGGTTGCGAAAGGTCAAGAAATTCGTAATATCCAAGTGTTAGCACCAATGTACAAAGGTCCAGCAGG
AATAGACAATTTAAATAAAATGATTCAGGAGCTAATTAATCCAAACGATACTGGTACTAGAAAAGAGCTTGTCTTTGGTG
ATGTCACATATCGCATAAAGGATAAAGTCTTACAGCTTGTCAATCAACCTGAAAGCAATGTTTTTAATGGTGATATGGGT
GAAGTCATCAGTATTATCAAGGCTAAGGAAACAATTGAGAAACAAGATTTGCTTGTTGTGTCATTCGATGGTATAGAAGT
AACTTATCAGCGTAGTGATCTCAATCAATTGACACTTGCTTATTGTTGTTCTATTCATAAATCGCAAGGCTCTGAGTTCC
AAACAGTTATTATGCCAGTTGTACGAGGCTATTCTAAAATGTTGCGTCGTAATTTATTATATACAGGTATTACGCGTGCA
AAAAATTTCTTGATTTTATGTGGTGAGTCAGATGTGCTAGCAGATGGCTTACAACGTACGGATGATTTACAGCGCTTTAC
GTCCTTACGTGCAAGACTCAATCCAATGAATATAGCAGAGGAAGTTGCGGAAGATGAAACGATTCCTTTGAAAGACGATT
TACAGAAAGAAAAACCATCCATTGATAGTAAACTAACGGTCGAAACGGAACCATATATCCATCCTTTGATTGGAATGGAT
GGTATCTCGCCGTATGATTATTTAGATGAGTAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-727)

• AAA domain (AAA_30) (343-550)

• Helix-hairpin-helix containing domain (HHH_RecD2) (159-247)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (591-660)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	53.409	97.778	0.522