Detailed information NTG1037710

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ACB337_RS08200
• Genome accession: NZ_CP167017
• Coordinates: 1605758..1606681 (-)
• Length: 307 a.a.
• NCBI ID: WP_023612424.1
• Uniprot ID: A0A5S4TJJ9
• Organism: Streptococcus pyogenes strain Isolate 9
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1600758..1611681

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB337_RS08195 (ACB337_08200)	-	1605637..1605720 (+)	84	Protein_1553	IS3 family transposase	-
ACB337_RS08200 (ACB337_08205)	amiF	1605758..1606681 (-)	924	WP_023612424.1	ABC transporter ATP-binding protein	Regulator
ACB337_RS08205 (ACB337_08210)	amiE	1606674..1607744 (-)	1071	WP_010921893.1	ABC transporter ATP-binding protein	Regulator
ACB337_RS08210 (ACB337_08215)	amiD	1607753..1608679 (-)	927	WP_010921892.1	oligopeptide ABC transporter permease OppC	Regulator
ACB337_RS08215 (ACB337_08220)	amiC	1608679..1610181 (-)	1503	WP_010921891.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34741.94 Da
• Isoelectric Point: 6.4036

>NTDB_id=1037710 ACB337_RS08200 WP_023612424.1 1605758..1606681(-) (amiF) [Streptococcus pyogenes strain Isolate 9]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKNMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERQKELVVYYPDQHDYTLDKPSMVEIKPNHFVWANQAEIEKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1037710 ACB337_RS08200 WP_023612424.1 1605758..1606681(-) (amiF) [Streptococcus pyogenes strain Isolate 9]
ATGTCTGAGAAATTAGTCGAAGTAAAAGACCTAGAAATTTCCTTCGGAGAAGGAAAGAAAAAATTTGTTGCAGTTAAAAA
TGCTAATTTCTTTATTAAAAAAGGAGAAACCTTTTCTTTAGTTGGAGAATCTGGGAGTGGTAAAACAACAATTGGTCGTG
CTATTATTGGTTTGAACGATACTAGTTCAGGTCAAATTTTATACGATGGGAAAGTAATTAATGGCAGAAAATCAAAATCA
GAAGCCAATGAGCTCATTCGTAAAATTCAAATGATTTTCCAAGATCCCGCTGCTAGTTTGAATGAACGGGCAACCGTTGA
CTACATCATTTCAGAAGGTCTTTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGAACATGA
TGGCCGAAGTTGGTTTGCTATCAGAGCATTTGACGCGCTACCCTCATGAATTTTCAGGAGGTCAACGTCAGCGGATCGGT
ATCGCTAGAGCCCTAGTAATGAACCCTGAATTCGTTATTGCTGATGAACCGATTTCAGCTTTGGACGTTTCCGTTCGCGC
ACAGGTCTTGAATCTTCTTAAAAGAATGCAAGCCGAAAAAGGTTTGACTTATCTCTTCATTGCCCATGATCTTTCAGTCG
TTCGCTTTATTTCAGATCGTATTGCGGTTATCCATAAAGGGGTTATTGTAGAAGTTGCAGAAACAGAAGAACTGTTTAAT
AACCCAATTCATCCCTACACCCAATCTTTGTTATCAGCCGTGCCTATCCCAGATCCAATTTTAGAGCGTCAAAAAGAACT
TGTTGTCTATTATCCAGACCAACATGATTATACATTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTGAAAAATATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-261)

3D structure

• AlphaFold DB: A0A5S4TJJ9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818