Detailed information NTG1036435

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: ACA346_RS06295
• Genome accession: NZ_CP166970
• Coordinates: 1230256..1231095 (-)
• Length: 279 a.a.
• NCBI ID: WP_418126398.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain NX1
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1225256..1236095

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACA346_RS06280 (ACA346_06280)	pheT	1225420..1227819 (-)	2400	WP_418126395.1	phenylalanine--tRNA ligase subunit beta	-
ACA346_RS06285 (ACA346_06285)	-	1227821..1228342 (-)	522	WP_289648708.1	GNAT family N-acetyltransferase	-
ACA346_RS06290 (ACA346_06290)	pheS	1228961..1230004 (-)	1044	WP_174845671.1	phenylalanine--tRNA ligase subunit alpha	-
ACA346_RS06295 (ACA346_06295)	endA	1230256..1231095 (-)	840	WP_418126398.1	DNA/RNA non-specific endonuclease	Machinery gene
ACA346_RS06300 (ACA346_06300)	-	1231125..1231316 (-)	192	WP_130554299.1	DNA-directed RNA polymerase subunit beta	-
ACA346_RS06305 (ACA346_06305)	murA	1231309..1232592 (-)	1284	WP_418126400.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ACA346_RS06310 (ACA346_06310)	-	1232615..1232842 (-)	228	WP_130554297.1	DUF1146 family protein	-
ACA346_RS06315 (ACA346_06315)	-	1232955..1234115 (-)	1161	WP_418126402.1	tyrosine-type recombinase/integrase	-
ACA346_RS06320 (ACA346_06320)	-	1234222..1234800 (-)	579	WP_418126404.1	helix-turn-helix domain-containing protein	-
ACA346_RS06325 (ACA346_06325)	-	1234953..1235150 (+)	198	WP_418126406.1	helix-turn-helix domain-containing protein	-
ACA346_RS06330 (ACA346_06330)	-	1235162..1235779 (+)	618	WP_418126408.1	Rha family transcriptional regulator	-

Sequence

Protein

• Length: 279 a.a.
• Molecular weight: 30153.40 Da
• Isoelectric Point: 6.2390

>NTDB_id=1036435 ACA346_RS06295 WP_418126398.1 1230256..1231095(-) (endA) [Streptococcus parasuis strain NX1]
MAKKNEKKQAMSLLSLLATIVVVAGGYLLSDNKSSNVADYSYYVNRSKASEGTPSQELANSVLTEDVKKQLGNSIEWNGA
GAFIINGNQTDLDASVASVPYGDNKTKIVQGETVPTVANALLAKSTRQYKDREATGNGRTSWTPAGWHQIHDLPGEYDHA
VDRGHLLGYALIGGLAGFDASTSNPKNIAVQTAWSNQANDQTSTGQNYFESQIRRALDKNKRVRYRVTLVYAESEDLVPV
GSHLEAKAADGSLEFNVFVPNVQSGLSINYHSGEIAVNE

Nucleotide

• Length: 840 bp

>NTDB_id=1036435 ACA346_RS06295 WP_418126398.1 1230256..1231095(-) (endA) [Streptococcus parasuis strain NX1]
ATGGCGAAGAAAAATGAAAAAAAACAAGCAATGAGTTTGCTCAGCTTATTGGCTACGATTGTTGTAGTAGCGGGTGGCTA
TCTTTTAAGCGATAACAAGAGCAGTAACGTTGCTGATTATTCCTATTATGTCAATCGGTCTAAGGCAAGTGAAGGCACAC
CTAGTCAGGAACTGGCTAATTCAGTATTGACAGAAGATGTAAAAAAGCAACTGGGGAATTCGATTGAATGGAATGGCGCT
GGAGCATTTATTATTAACGGGAATCAAACGGATTTAGATGCATCGGTTGCCAGTGTTCCTTATGGTGATAATAAGACAAA
AATAGTCCAAGGAGAAACGGTTCCAACAGTAGCCAATGCGCTTTTAGCCAAATCTACACGTCAGTATAAGGACCGTGAAG
CAACTGGTAATGGACGTACGTCATGGACTCCTGCTGGCTGGCACCAAATTCATGATTTGCCAGGGGAATATGATCATGCA
GTTGATCGTGGACATCTTTTAGGCTATGCCTTGATTGGTGGTCTTGCTGGATTTGATGCCTCAACAAGTAATCCCAAAAA
CATAGCGGTTCAAACTGCCTGGTCTAATCAAGCTAACGACCAAACTTCAACTGGGCAGAATTATTTTGAAAGTCAAATTC
GGCGGGCCTTGGATAAAAATAAGCGTGTCCGCTATCGTGTGACCTTGGTGTATGCTGAGAGTGAAGACCTTGTTCCTGTC
GGAAGCCATCTAGAGGCAAAAGCAGCAGATGGTAGTCTAGAGTTCAATGTGTTCGTTCCAAATGTGCAGAGCGGTCTCAG
TATCAACTATCATAGTGGGGAAATTGCAGTGAATGAGTAA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (81-236)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	65.49	91.398	0.599
endA	Streptococcus pneumoniae D39	65.49	91.398	0.599
endA	Streptococcus pneumoniae R6	65.49	91.398	0.599
endA	Streptococcus pneumoniae TIGR4	65.49	91.398	0.599