Detailed information NTG1035769

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: ABKQ09_RS13360
• Genome accession: NZ_CP166870
• Coordinates: 2669498..2671891 (-)
• Length: 797 a.a.
• NCBI ID: WP_010789325.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain F4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2664498..2676891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKQ09_RS13325 (ABKQ09_13320)	-	2665555..2666283 (+)	729	WP_061572700.1	amino acid ABC transporter ATP-binding protein	-
ABKQ09_RS13330 (ABKQ09_13325)	-	2666306..2667133 (+)	828	WP_061669878.1	transporter substrate-binding domain-containing protein	-
ABKQ09_RS13335 (ABKQ09_13330)	-	2667195..2667845 (+)	651	WP_061669877.1	amino acid ABC transporter permease	-
ABKQ09_RS13340 (ABKQ09_13335)	-	2667864..2668520 (+)	657	WP_371176014.1	amino acid ABC transporter permease	-
ABKQ09_RS13345 (ABKQ09_13340)	-	2668558..2668689 (-)	132	WP_003325315.1	YrzQ family protein	-
ABKQ09_RS13350 (ABKQ09_13345)	-	2668714..2668905 (-)	192	WP_003325314.1	hypothetical protein	-
ABKQ09_RS13355 (ABKQ09_13350)	-	2668918..2669382 (-)	465	WP_003325313.1	PRC-barrel domain-containing protein	-
ABKQ09_RS13360 (ABKQ09_13355)	recD2	2669498..2671891 (-)	2394	WP_010789325.1	ATP-dependent RecD-like DNA helicase	Machinery gene
ABKQ09_RS13365 (ABKQ09_13360)	-	2671925..2672545 (-)	621	WP_094233205.1	tetratricopeptide repeat protein	-
ABKQ09_RS13370 (ABKQ09_13365)	mnmA	2672636..2673751 (-)	1116	WP_268488754.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABKQ09_RS13375 (ABKQ09_13370)	-	2673788..2674927 (-)	1140	WP_061669872.1	cysteine desulfurase family protein	-
ABKQ09_RS13380 (ABKQ09_13375)	cymR	2674946..2675362 (-)	417	WP_010789329.1	cysteine metabolism transcriptional regulator CymR	-
ABKQ09_RS13385 (ABKQ09_13380)	-	2675564..2676832 (+)	1269	WP_268364412.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89219.90 Da
• Isoelectric Point: 5.1233

>NTDB_id=1035769 ABKQ09_RS13360 WP_010789325.1 2669498..2671891(-) (recD2) [Bacillus atrophaeus strain F4]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELKALQKELPFSVYDANIGMEGITPFDFMKEEHS

Nucleotide

• Length: 2394 bp

>NTDB_id=1035769 ABKQ09_RS13360 WP_010789325.1 2669498..2671891(-) (recD2) [Bacillus atrophaeus strain F4]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTTTTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTC
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTCAAAAAACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGAAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGGCATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATTGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCTTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATCGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTTGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTTCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CCGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAAAAAGATGAA
GTTTTTCCGTTTGTTTTGGCTGCGCCGACAGGAAGAGCCGCAAAACGAATGAGTGAGTCGACCGGACTTCCGGCCGTCAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTTGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCACAGGTCATTCC
GACAGTCAGGCTGACGGATATTTACCGGCAGGCGGAAGGTTCATCTATTGTGGAGCTTGCTCATGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCGCCGACGAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTT
GAAAAGGTCGTCACCAATGCGCTGAAAAAAGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACCTTCACCAAAAAAGACTTCAGCCAGTTTACGCACGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACGCTGCAAGCTGAGGAAATGGATGAAGAACTTAAAGCTCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACGCCATTTGATTTCATGAAAGAAGAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• AAA domain (AAA_30) (345-553)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	92.095	100	0.921