Detailed information NTG1035544

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB3239_RS14500
• Genome accession: NZ_CP166831
• Coordinates: 2760614..2763010 (-)
• Length: 798 a.a.
• NCBI ID: WP_370956903.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TE3T-UV25
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2755614..2768010

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB3239_RS14465 (AB3239_14465)	glnQ	2756689..2757417 (+)	729	WP_032726290.1	amino acid ABC transporter ATP-binding protein	-
AB3239_RS14470 (AB3239_14470)	glnH	2757438..2758259 (+)	822	WP_370956902.1	glutamine ABC transporter substrate-binding protein GlnH	-
AB3239_RS14475 (AB3239_14475)	glnM	2758320..2758970 (+)	651	WP_041850168.1	amino acid ABC transporter permease	-
AB3239_RS14480 (AB3239_14480)	glnP	2758987..2759643 (+)	657	WP_003229784.1	amino acid ABC transporter permease	-
AB3239_RS14485 (AB3239_14485)	yrzQ	2759678..2759809 (-)	132	WP_003229780.1	YrzQ family protein	-
AB3239_RS14490 (AB3239_14490)	-	2759831..2760022 (-)	192	WP_003225893.1	hypothetical protein	-
AB3239_RS14495 (AB3239_14495)	yrrD	2760034..2760558 (-)	525	WP_072173323.1	PRC-barrel domain-containing protein	-
AB3239_RS14500 (AB3239_14500)	recD2	2760614..2763010 (-)	2397	WP_370956903.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB3239_RS14505 (AB3239_14505)	yrrB	2763035..2763655 (-)	621	WP_370957462.1	tetratricopeptide repeat protein	-
AB3239_RS14510 (AB3239_14510)	mnmA	2763741..2764856 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB3239_RS14515 (AB3239_14515)	iscSA	2764887..2766026 (-)	1140	WP_041850172.1	cysteine desulfurase family protein	-
AB3239_RS14520 (AB3239_14520)	cymR	2766045..2766461 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
AB3239_RS14525 (AB3239_14525)	rarA	2766664..2767929 (+)	1266	WP_014480427.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 89198.80 Da
• Isoelectric Point: 5.0708

>NTDB_id=1035544 AB3239_RS14500 WP_370956903.1 2760614..2763010(-) (recD2) [Bacillus subtilis strain TE3T-UV25]
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPALQEEETYTFYGKIVTHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSAINKILADASVLYDVPRLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERVKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFPSLFYAEQNVAKRVKHIASQT
EYENQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKD
EAFPIVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNLTAPTKDRSFIRCGGSQIKEV
VEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNVMLQDILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGD
IGEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSVQVEEMDAELEALQKELLFSVHDANIGMEGITPFDFMKEEQQ

Nucleotide

• Length: 2397 bp

>NTDB_id=1035544 AB3239_RS14500 WP_370956903.1 2760614..2763010(-) (recD2) [Bacillus subtilis strain TE3T-UV25]
GTGCAGCAGCATCCGGATCAGCTTAAACTGGAGGAAGAGCCCTATTTAAAAGGGACAGTCAACACAGTCATCTATCATAA
TGACACCAATTTATATACGGTTCTGAAAGTGAAAGTCACAGAGACCTCCGAAGCCATTGAAGATAAAGCCGTATCCGTGA
CGGGCTACTTCCCTGCGCTTCAAGAAGAAGAGACCTACACGTTTTACGGAAAGATCGTAACCCATCCAAAGTTCGGGCTC
CAATTTCAGGCGGAGCATTTCAAAAAGGAGATTCCAACGACTAAGGAAGGCATCATTCAATATTTATCGAGTGATTTATT
CGAGGGGATCGGCAAAAAAACAGCTGAAGAAATTGTGAAAAAGCTGGGCGACAGCGCCATTAATAAAATATTGGCTGATG
CTTCAGTGCTTTATGATGTTCCCAGACTCTCAAAAAAGAAAGCCGACACGCTGGCTGGCGCATTGCAGCGGCATCAGGGA
CTGGAGCAAATCATGATTTCCTTGAATCAGTTTGGCTTTGGCCCGCAGCTGTCTATGAAAATCTATCAAGCCTATGAATC
CGAGACGCTTGAAAAGATTCAGGAAAATCCTTATCAGCTTGTGAAGGATGTAGAAGGCATCGGGTTTGGGAAAGCGGATG
AGCTGGGCAGCAGAATGGGTCTTTCGGGTAACCATCCTGAGCGGGTAAAAGCTGCTATTTTGTACACGCTTGAAACGACT
TGTCTGTCAGAGGGGCACACGTACATAGAAACGGAACAGCTGATCATTGACACCCAATCTCTGTTAAACCAGTCAGCAAG
GGAAGGACAGCGCATCACAGAAATGGATGCCGCTAATGCGATTATTGCCCTTGGAGAAAATAAAGACATTGTCATAGAAG
ATGGCCGCTGTTATTTTCCATCGCTGTTTTACGCAGAACAAAACGTTGCAAAGCGTGTGAAACATATCGCTAGCCAAACC
GAATATGAGAACCAGTTTCCCGAATCAGAGTTTTTGCTCGCGTTGGGAGAACTGGAAGAACGGATGAACGTTCAGTATGC
CCCCAGCCAGAAGGAAGCGATTCAAAAAGCCCTTTCCTCGCCGATGCTTCTTTTAACAGGCGGCCCGGGAACAGGAAAAA
CGACGGTAATCAGAGGGATTGTCGAGCTCTACGGAGAGCTTCACGGTGTGTCACTAGATCCGTCAGCTTATAAAAAGGAT
GAAGCTTTTCCGATTGTTTTGGCCGCTCCGACAGGGAGAGCAGCAAAACGGATGAGTGAATCAACGGGACTCCCTGCAGT
CACGATACACAGGCTGCTTGGCTGGAACGGTGCTGAAGGCTTTACTCATACAGAGGATCAGCCGATCGAAGGGAAGCTGT
TAATTATCGATGAAGCCAGTATGCTTGATATATGGCTGGCGAATCATTTGTTCAAGGCGATCCCTGATCATATACAAATC
ATCATTGTCGGAGACGAAGACCAGCTGCCTTCTGTCGGTCCGGGACAAGTGCTCAGAGACTTGCTGGCATCCCAGGTGAT
TCCGACTGTGAGACTGACAGACATCTATCGTCAGGCGGAGGGGTCATCAATCGTCGAGCTTGCCCACCAGATGAAAAATG
GATTGCTGCCGAACAATTTGACTGCCCCGACAAAGGACCGTTCCTTTATTCGCTGCGGCGGCTCGCAAATCAAAGAAGTA
GTTGAGAAGGTTGTCGCCAATGCATTGAAAAAAGGCTATACAGCAAAGGACATTCAGGTCCTCGCTCCGATGTACAGAGG
AAAAGCCGGCATTAATGAATTGAATGTGATGCTGCAGGACATTTTAAATCCTCCTAAAGAAAAACGGAGAGAATTGAAGT
TCGGGGATGTTGTCTACAGAACCGGAGATAAAATTTTGCAGCTTGTCAATCAGCCGGAAAACAATGTATTCAACGGAGAT
ATTGGCGAAATCACGTCGATATTTTATGCAAAGGAAAATACAGAAAAAGAAGACATGGCCGTTGTTTCTTTTGATGGCAA
TGAAATGACGTTTACGAAAAAAGATTTTAATCAATTTACCCATGCGTATTGCTGTTCTATTCATAAATCGCAGGGAAGTG
AATTTCCGATTGTGGTTTTGCCTGTTGTGAAAGGCTATTATAGAATGCTCAGAAGAAACCTTCTTTATACCGCGATTACA
AGAGCGAAGAAATTTCTCATTTTATGCGGTGAGGAGGAGGCGCTGGAGTGGGGCGTAAAAAATAATGATGCAACTGTCAG
ACAGACCTCTTTGAAAAACAGGCTGTCCGTACAGGTTGAGGAAATGGATGCCGAGCTTGAAGCTTTGCAAAAAGAGCTCC
TGTTCAGCGTACACGACGCCAACATTGGCATGGAAGGCATTACACCATTCGATTTTATGAAAGAAGAACAGCAATAA

Domains

Predicted by InterproScan.

• UvrD-like helicase C-terminal domain (UvrD_C_2) (681-729)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-662)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• AAA domain (AAA_30) (346-553)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	99.749	100	0.997