Detailed information NTG1035181

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DYY94_RS12765
• Genome accession: NZ_LT996890
• Coordinates: 2475253..2476527 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate 24117-SCV
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2470253..2481527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DYY94_RS12740	hisS	2470814..2472076 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
DYY94_RS12745	aspS	2472092..2473858 (+)	1767	WP_000044799.1	aspartate--tRNA ligase	-
DYY94_RS12755	-	2474191..2474319 (+)	129	WP_001808243.1	hypothetical protein	-
DYY94_RS12760	-	2474319..2475092 (+)	774	WP_000682646.1	tRNA threonylcarbamoyladenosine dehydratase	-
DYY94_RS12765	rarA	2475253..2476527 (-)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
DYY94_RS12770	cymR	2476612..2477034 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
DYY94_RS12775	-	2477134..2477316 (+)	183	WP_000752909.1	CsbD family protein	-
DYY94_RS12780	-	2477356..2477502 (+)	147	WP_000009238.1	SAS049 family protein	-
DYY94_RS12785	-	2477739..2478752 (-)	1014	WP_000985872.1	LLM class flavin-dependent oxidoreductase	-
DYY94_RS12790	-	2479064..2480206 (+)	1143	WP_000409174.1	cysteine desulfurase family protein	-
DYY94_RS12795	mnmA	2480207..2481325 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=1035181 DYY94_RS12765 WP_000102740.1 2475253..2476527(-) (rarA) [Staphylococcus aureus isolate 24117-SCV]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=1035181 DYY94_RS12765 WP_000102740.1 2475253..2476527(-) (rarA) [Staphylococcus aureus isolate 24117-SCV]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGATACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTTGAGTTATATCCTTTAAATGATGAAGATGTGCGCCAAGCTTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686