Detailed information NTG1034900

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB9097_RS07685
• Genome accession: NZ_CP166680
• Coordinates: 1529450..1531846 (-)
• Length: 798 a.a.
• NCBI ID: WP_046335895.1
• Uniprot ID: -
• Organism: Listeria monocytogenes strain 11-04869
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1524450..1536846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9097_RS07665 (AB9097_07665)	-	1524913..1525608 (-)	696	WP_003723691.1	ABC transporter ATP-binding protein	-
AB9097_RS07670 (AB9097_07670)	-	1525617..1527119 (-)	1503	WP_046335897.1	ABC transporter permease	-
AB9097_RS07675 (AB9097_07675)	pieR	1527286..1527972 (+)	687	WP_003723693.1	two component system response regulator PieR	-
AB9097_RS07680 (AB9097_07680)	pieS	1527969..1529408 (+)	1440	WP_010990146.1	two component system sensor histidine kinase PieS	-
AB9097_RS07685 (AB9097_07685)	recD2	1529450..1531846 (-)	2397	WP_046335895.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB9097_RS07690 (AB9097_07690)	-	1531874..1532512 (-)	639	WP_010990147.1	tetratricopeptide repeat protein	-
AB9097_RS07695 (AB9097_07695)	-	1532553..1533293 (-)	741	WP_012951642.1	alpha/beta hydrolase	-
AB9097_RS07700 (AB9097_07700)	mnmA	1533411..1534526 (-)	1116	WP_026749969.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB9097_RS07705 (AB9097_07705)	-	1534545..1535693 (-)	1149	WP_014600850.1	cysteine desulfurase family protein	-

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90023.11 Da
• Isoelectric Point: 4.8048

>NTDB_id=1034900 AB9097_RS07685 WP_046335895.1 1529450..1531846(-) (recD2) [Listeria monocytogenes strain 11-04869]
MAEQESLALFDDTTEELFMKGTMLSTIFYNAENLFSVVRILVKETNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAK
FGQQFKADRFRKEMPQSRAGLINYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRE
NQGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDVKGIGFQRADELGRKLGLGGNHPERLRAGILFML
DSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQSILVAQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQ
TEYQEQFPQSEFLLALGELEERIGVHYGDSQRQALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVSLDPHAYKD
GATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLIDGRLLIVDEMSMVDIWLANQLFRALPAHMQ
VVLVGDQDQLPSVGPGQVLKDILQSDQIPTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFTKNSADRSFFHCTVNQIGD
VVEQVVKNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGDIKYRVHDKVLQLINQPEKNVFN
GDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLTHAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLLYTG
VTRSKQFLILCGEEEAFRMGIERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITAIDPMIGMEGITPEQFMVG

Nucleotide

• Length: 2397 bp

>NTDB_id=1034900 AB9097_RS07685 WP_046335895.1 1529450..1531846(-) (recD2) [Listeria monocytogenes strain 11-04869]
ATGGCTGAACAAGAATCACTCGCCTTATTTGATGATACAACGGAAGAACTTTTCATGAAGGGCACGATGTTGTCTACCAT
TTTTTACAATGCCGAAAACCTCTTTTCTGTCGTACGAATATTGGTAAAAGAAACAAATGCGGATTGGGACGAAAAAGATA
TTATCGTAACTGGCTTTTTCCCAGCACTCCACGAACAAGAAGTCTACACTTTCTACGGAAAAATGCAGGAACATGCTAAA
TTTGGTCAACAATTCAAAGCAGACCGGTTTCGTAAAGAAATGCCACAATCACGCGCTGGTTTAATTAATTATCTTTCTGG
AGAACTTTTTAAAGGAATTGGTAAAGTAACCGCTGAAAATATTGTGGATACGATTGGCGATGATGCTATTACGAAAATTT
TATCCGATCCGAGTTTGTTAAACACGGTACCTAAGTTGCCATCCGGTGCAGCGGAAAGTTTGCTTGCTTCCCTTAGAGAA
AATCAGGGATTAGAGCATGTGATGGTCGGTTTAAACGAATATGGCTTTGGCCCGCAATTATCCATGAAAATTTTCCAGGC
CTATAAACAAAATGCTATTGAAGTGTTAGAGAATAATCCTTATAAATTGATTGAGGACGTAAAAGGGATTGGTTTTCAGC
GTGCCGATGAGCTTGGACGGAAACTCGGTCTTGGCGGGAATCATCCAGAACGGCTTCGCGCAGGGATTTTATTTATGTTA
GATTCGGTTTGTATGCAACAAGGTCACGTATACATGGAGCAAGAGGTTCTGCTTGGAGAAGTGACATATTTGCTAGAAGA
AAGTGAAGGCATTCGAATTGACCAAAGTATTTTAGTAGCTCAAGTAGAAAAATTGGCCGAGGAACAAAAGATTATTACGG
AAAACACACGCGTATACATGCCATCGCTCTATTATTCAGAGAGTGGCTTTGCATATCATGTGAAGCGAATGCTTAAACAA
ACAGAATACCAAGAACAATTTCCACAATCCGAATTTTTACTAGCTCTAGGAGAATTAGAAGAAAGGATTGGCGTTCATTA
CGGAGACTCACAACGACAGGCTTTAGAACAAGCTTTAATGTCTCCGATGCTCGTACTTACTGGTGGTCCTGGAACAGGGA
AAACAACGGTCATTAAAGGGATAGTGGAGCTGTATGCGGAACTAAATGGTGTGAGTCTTGATCCCCATGCTTACAAAGAT
GGAGCGACTTTCCCCGTTCTTCTTGCTGCTCCAACTGGTCGTGCCGCTAAACGGATGTCAGAGTCAACTGGACTTCCTGC
GATGACTATTCACCGTCTACTCGGAATGAATGGTCAAGAACAAATGGATGATGATGCAGAAAGACTGATTGATGGACGAC
TGTTGATTGTGGATGAGATGTCGATGGTTGATATTTGGCTTGCTAATCAATTATTCCGTGCTTTACCAGCGCACATGCAA
GTGGTACTCGTTGGCGACCAAGATCAGTTGCCTTCAGTCGGACCGGGTCAAGTACTCAAAGATATTCTGCAATCTGACCA
AATTCCAACTGTAGCTCTTTCAGATATTTATCGCCAAAAGGATGGTTCTTCCATTATCGAAATGGCGCATTATATAAAAG
AAGGCATGTTGCCAGCTGATTTCACCAAAAATAGCGCCGATCGCTCCTTTTTTCATTGCACGGTAAATCAAATTGGTGAT
GTGGTCGAACAAGTGGTAAAAAATGCAAAAAACAAAGGGTTTCGAGCAAAAGATATCCAAGTTTTAGCACCAATGTATCG
TGGTCCCGCAGGCATTGATATTTTAAATAAAAAACTACAAGAAATCTTCAATCCAAATGATACAGGGCGTCGTAAAGAAG
TTCAATTCGGTGACATAAAGTATCGCGTGCATGACAAAGTACTGCAATTGATTAATCAACCAGAGAAAAATGTGTTTAAC
GGTGATATCGGTGAAATTGTTTCTATAATCTACGCCAAAGAAAATACCGAAAAACAAGATCTGATTGTCGTTCAATTTGA
CCAAACAGAGGTTTCTTACTATAGGCAAGAATTTAATCAATTGACCCATGCTTATTGTTGTTCGATTCATAAAGCGCAGG
GAAGTGAATTTCCGATTGTGATTATGCCGATTGTCCGCAGTTACTACCGGATGTTACGTCGCGATTTACTCTACACTGGA
GTAACGCGGAGTAAACAATTTCTCATTCTTTGCGGGGAAGAAGAAGCTTTTCGAATGGGGATAGAACGAATTGATGAAAA
TAAGCGTAATACAACACTCTCTGAACGTTTAATGAGCGAAGATGTTTTATTAGAACAAATGACGAATAAACGAATTCTTA
CTGCTGAAAACATTACGGCAATTGATCCGATGATTGGAATGGAAGGGATTACTCCAGAACAGTTTATGGTAGGATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (595-666)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

• AAA domain (AAA_30) (347-554)

• Helix-hairpin-helix containing domain (HHH_RecD2) (160-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	57.36	98.747	0.566