Detailed information NTG1034683

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AB6911_RS14240
• Genome accession: NZ_CP166481
• Coordinates: 2770641..2773034 (-)
• Length: 797 a.a.
• NCBI ID: WP_003325312.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain globigii
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2765641..2778034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6911_RS14205 (AB6911_14185)	-	2766698..2767426 (+)	729	WP_003325320.1	amino acid ABC transporter ATP-binding protein	-
AB6911_RS14210 (AB6911_14190)	-	2767449..2768276 (+)	828	WP_003325319.1	transporter substrate-binding domain-containing protein	-
AB6911_RS14215 (AB6911_14195)	-	2768338..2768988 (+)	651	WP_003325317.1	amino acid ABC transporter permease	-
AB6911_RS14220 (AB6911_14200)	-	2769007..2769663 (+)	657	WP_003325316.1	amino acid ABC transporter permease	-
AB6911_RS14225 (AB6911_14205)	-	2769701..2769832 (-)	132	WP_003325315.1	YrzQ family protein	-
AB6911_RS14230 (AB6911_14210)	-	2769857..2770048 (-)	192	WP_003325314.1	hypothetical protein	-
AB6911_RS14235 (AB6911_14215)	-	2770061..2770525 (-)	465	WP_003325313.1	PRC-barrel domain-containing protein	-
AB6911_RS14240 (AB6911_14220)	recD2	2770641..2773034 (-)	2394	WP_003325312.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AB6911_RS14245 (AB6911_14225)	-	2773068..2773688 (-)	621	WP_087941820.1	tetratricopeptide repeat protein	-
AB6911_RS14250 (AB6911_14230)	mnmA	2773779..2774894 (-)	1116	WP_003325310.1	tRNA 2-thiouridine(34) synthase MnmA	-
AB6911_RS14255 (AB6911_14235)	-	2774931..2776070 (-)	1140	WP_003325308.1	cysteine desulfurase family protein	-
AB6911_RS14260 (AB6911_14240)	cymR	2776089..2776505 (-)	417	WP_003325307.1	cysteine metabolism transcriptional regulator CymR	-
AB6911_RS14265 (AB6911_14245)	-	2776708..2777976 (+)	1269	WP_003325306.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 797 a.a.
• Molecular weight: 89218.95 Da
• Isoelectric Point: 5.2283

>NTDB_id=1034683 AB6911_RS14240 WP_003325312.1 2770641..2773034(-) (recD2) [Bacillus atrophaeus strain globigii]
MQQHPDQLKMEEEPFLKGAVTTVIYHNDANLYTVLKVKVTETSEAIEDKVVSVTGYFPALQEEETYTFYGKTATHPKFGL
QFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVKKLGDSALNRILADSSVLYDVPKLSKKKADTLAGALQRHQG
LEQIMISLNQFGFGPQLSMKIYQAYESETLEKIQENPYQLVKDVEGIGFVKADELGGRMGISGNHPERIKAAILYSIETT
CLSEGHTYIETKQLIIDTQKLLNQSSEGQLVTEMDAANEIIALGENKAIMIEDDRCYFPSLYYAEQNVAKRVRHIASQTE
YEDQFPESEFLLALGDLEERTKVQYAASQKEAIQKALSSPMLLLTGGPGTGKTTVIRGIVELYSELHGASLDPSDYKKDE
VFPFVLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTHTDENPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQII
IVGDEDQLPSVGPGQVLRDLLASQVIPTVRLTDIYRQAEGSSIVELAHDMKKGLLPANLTAPTKDRSFIRCGSLQIKEVV
EKVVTNALKKGYTARDIQVLAPMYRGKAGINELNVLLQGILNPPKEKRREIKFGDVVYRTGDKILQLVNQPENNVFNGDI
GEITSIFYAKENTEKEDMAVVSFDGNEMTFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITR
AKKFLILCGEEEALEWGVKNNDATVRQTSLQRRLTLQAEEMDEELKALQKELPFSVYDANIGMEGITPFDFMKEKHS

Nucleotide

• Length: 2394 bp

>NTDB_id=1034683 AB6911_RS14240 WP_003325312.1 2770641..2773034(-) (recD2) [Bacillus atrophaeus strain globigii]
GTGCAGCAGCATCCGGATCAGCTGAAAATGGAGGAAGAACCCTTTTTAAAAGGTGCGGTAACCACTGTCATTTATCATAA
TGATGCCAATTTATATACAGTTTTGAAAGTGAAAGTCACAGAGACCTCCGAAGCGATTGAAGATAAAGTCGTATCCGTGA
CGGGCTACTTCCCTGCGCTGCAAGAAGAAGAGACCTACACGTTTTACGGAAAAACAGCCACCCATCCTAAATTCGGGCTC
CAGTTTCAAGCGGAGCACTTTAAAAAAGAGATCCCGACTACGAAGGAAGGGATCATCCAATACTTATCAAGTGATCTGTT
CGAAGGAATCGGAAAGAAAACGGCTGAAGAAATCGTCAAAAAACTGGGAGACAGCGCTCTTAATCGAATTCTCGCTGACT
CCTCAGTGCTTTACGATGTGCCGAAGCTGTCAAAAAAGAAAGCTGATACGCTGGCAGGAGCTCTTCAGCGGCATCAGGGC
CTGGAACAAATTATGATCTCGCTGAACCAGTTCGGATTCGGTCCGCAGCTTTCAATGAAAATTTATCAGGCATATGAATC
GGAAACACTTGAGAAGATTCAAGAAAATCCGTATCAGCTTGTGAAAGATGTGGAAGGCATCGGGTTTGTGAAAGCCGATG
AACTCGGGGGGAGAATGGGGATTTCCGGCAATCACCCTGAGCGGATTAAAGCAGCGATTTTGTATTCCATTGAAACGACA
TGTCTTTCAGAAGGGCATACGTACATAGAAACAAAGCAGCTTATTATTGATACGCAAAAGCTTTTGAACCAATCATCAGA
AGGACAGCTGGTGACAGAGATGGACGCAGCGAATGAAATCATCGCGCTTGGCGAAAATAAAGCTATCATGATTGAGGATG
ACCGCTGTTACTTTCCATCTTTATATTATGCGGAACAAAACGTAGCCAAGCGTGTCCGGCATATCGCAAGCCAAACTGAG
TATGAAGACCAATTTCCTGAATCTGAGTTTTTACTCGCGCTCGGTGATCTCGAAGAGCGTACGAAAGTTCAGTATGCGGC
AAGCCAAAAAGAAGCGATTCAAAAAGCGCTCTCGTCCCCGATGCTTCTGTTAACGGGAGGACCCGGCACCGGAAAAACCA
CTGTTATCAGAGGGATTGTGGAGTTATACAGTGAGCTTCACGGCGCTTCGCTTGATCCGTCCGATTATAAGAAAGATGAA
GTTTTTCCGTTTGTTTTGGCTGCGCCGACAGGAAGAGCGGCAAAACGAATGAGTGAGTCGACCGGACTTCCGGCCGTCAC
GATTCACAGGCTGCTTGGCTGGAACGGGGCTGAAGGGTTTACTCATACAGACGAAAATCCGATTGAAGGAAAGCTGTTAA
TTATAGACGAAGCGAGTATGCTTGATATATGGCTCGCAAACCATTTGTTTAAAGCGATACCCGATCATATTCAAATTATT
ATAGTTGGGGATGAGGACCAGCTTCCTTCTGTCGGGCCGGGACAGGTGCTGCGGGATCTGTTGGCTTCACAGGTCATTCC
GACAGTCAGGCTGACGGATATTTACCGGCAGGCGGAAGGTTCATCTATTGTGGAGCTTGCTCATGACATGAAAAAAGGCT
TGCTTCCGGCTAACCTGACAGCGCCGACGAAGGATCGTTCCTTTATTCGCTGCGGCTCATTACAAATCAAAGAAGTTGTT
GAAAAGGTCGTCACCAATGCGCTGAAAAAAGGCTACACAGCAAGGGATATACAGGTGCTGGCTCCGATGTACAGAGGAAA
AGCAGGCATTAATGAGCTTAATGTGCTGCTGCAGGGCATCTTAAATCCGCCGAAAGAAAAACGGCGCGAAATTAAATTCG
GCGATGTTGTTTATAGAACCGGCGATAAAATTTTACAGCTTGTGAATCAGCCGGAAAATAATGTGTTTAATGGTGATATT
GGTGAGATTACATCCATTTTCTACGCGAAGGAAAATACAGAAAAAGAAGATATGGCGGTTGTTTCCTTTGACGGAAATGA
AATGACCTTCACCAAAAAAGACTTCAGCCAGTTTACGCACGCCTATTGCTGCTCCATTCATAAATCTCAAGGCAGTGAAT
TTCCGATAGTCGTGCTTCCCGTTGTAAAAGGCTATTATCGAATGCTGAGAAGAAATCTCCTCTATACGGCAATTACAAGA
GCGAAAAAGTTTCTCATTTTATGCGGTGAAGAGGAAGCGCTGGAGTGGGGCGTGAAAAATAATGATGCGACAGTCAGACA
AACCTCTTTACAAAGAAGGCTGACGCTGCAGGCTGAGGAAATGGATGAAGAACTTAAAGCTCTTCAAAAAGAGCTGCCGT
TTAGCGTATACGACGCAAATATCGGCATGGAAGGCATTACACCATTTGATTTCATGAAAGAAAAACATAGCTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-661)

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-248)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	91.97	100	0.92