Detailed information NTG1034531

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DXE57_RS07105
• Genome accession: NZ_LT992476
• Coordinates: 1351961..1353235 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate 21_LA_436
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1346961..1358235

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXE57_RS07080	hisS	1347522..1348784 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
DXE57_RS07085	aspS	1348800..1350566 (+)	1767	WP_000044794.1	aspartate--tRNA ligase	-
DXE57_RS07095	-	1350899..1351027 (+)	129	WP_014937034.1	hypothetical protein	-
DXE57_RS07100	-	1351027..1351800 (+)	774	WP_000682648.1	tRNA threonylcarbamoyladenosine dehydratase	-
DXE57_RS07105	rarA	1351961..1353235 (-)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
DXE57_RS07110	cymR	1353320..1353742 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
DXE57_RS07115	-	1353842..1354024 (+)	183	WP_000752909.1	CsbD family protein	-
DXE57_RS07120	-	1354064..1354210 (+)	147	WP_000009235.1	SAS049 family protein	-
DXE57_RS07125	-	1354447..1355460 (-)	1014	WP_000985891.1	LLM class flavin-dependent oxidoreductase	-
DXE57_RS07130	-	1355771..1356913 (+)	1143	WP_000409167.1	cysteine desulfurase family protein	-
DXE57_RS07135	mnmA	1356914..1358032 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=1034531 DXE57_RS07105 WP_000102740.1 1351961..1353235(-) (rarA) [Staphylococcus aureus isolate 21_LA_436]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=1034531 DXE57_RS07105 WP_000102740.1 1351961..1353235(-) (rarA) [Staphylococcus aureus isolate 21_LA_436]
GTGAGTACAGAACCATTAGCGTCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACACTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACACAATATAAATTTAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTAATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTTCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCTATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGCTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGCTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAATTTACTTAAACAAAGGCCATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686