Detailed information NTG1034433

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: DXE41_RS04020
• Genome accession: NZ_LT992475
• Coordinates: 713106..714380 (-)
• Length: 424 a.a.
• NCBI ID: WP_000102740.1
• Uniprot ID: -
• Organism: Staphylococcus aureus isolate 20_LA_415
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 708106..719380

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXE41_RS03995	hisS	708667..709929 (+)	1263	WP_000590826.1	histidine--tRNA ligase	-
DXE41_RS04000	aspS	709945..711711 (+)	1767	WP_000044794.1	aspartate--tRNA ligase	-
DXE41_RS04010	-	712044..712172 (+)	129	WP_014937034.1	hypothetical protein	-
DXE41_RS04015	-	712172..712945 (+)	774	WP_000682648.1	tRNA threonylcarbamoyladenosine dehydratase	-
DXE41_RS04020	rarA	713106..714380 (-)	1275	WP_000102740.1	replication-associated recombination protein A	Machinery gene
DXE41_RS04025	cymR	714465..714887 (+)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
DXE41_RS04030	-	714987..715169 (+)	183	WP_000752909.1	CsbD family protein	-
DXE41_RS04035	-	715209..715355 (+)	147	WP_000009235.1	SAS049 family protein	-
DXE41_RS04040	-	715592..716605 (-)	1014	WP_000985891.1	LLM class flavin-dependent oxidoreductase	-
DXE41_RS04045	-	716916..718058 (+)	1143	WP_000409167.1	cysteine desulfurase family protein	-
DXE41_RS04050	mnmA	718059..719177 (+)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47264.84 Da
• Isoelectric Point: 8.3539

>NTDB_id=1034433 DXE41_RS04020 WP_000102740.1 713106..714380(-) (rarA) [Staphylococcus aureus isolate 20_LA_415]
MSTEPLASRMRPKNIDEIISQQHLVGPRGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDEENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=1034433 DXE41_RS04020 WP_000102740.1 713106..714380(-) (rarA) [Staphylococcus aureus isolate 20_LA_415]
GTGAGTACAGAACCATTAGCGTCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACACTTAGTTGGACC
AAGAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACACAATATAAATTTAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTATTAGATGAAATCCATCGACTAGATAAAGC
CAAACAAGATTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTAATCGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTTCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGAAGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCTATGACCTACTTTTC
TACACAAAGTCAAGGTGATGTTCGTAGTGCGCTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAGGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGCTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATCCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGCCAAATTCCAAACCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAATTTACTTAAACAAAGGCCATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• AAA C-terminal domain (AAA_assoc_2) (175-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.286	99.057	0.686