Detailed information NTG1034051

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: AB6A22_RS08010
• Genome accession: NZ_CP166297
• Coordinates: 1643501..1644280 (+)
• Length: 259 a.a.
• NCBI ID: WP_003154263.1
• Uniprot ID: I2C545
• Organism: Bacillus velezensis strain FCW119-1M2
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1638501..1649280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6A22_RS07990 (AB6A22_08005)	trmFO	1639188..1640495 (+)	1308	WP_003154273.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
AB6A22_RS07995 (AB6A22_08010)	xerC	1640565..1641482 (+)	918	WP_007409774.1	tyrosine recombinase XerC	-
AB6A22_RS08000 (AB6A22_08015)	hslV	1641498..1642043 (+)	546	WP_003154267.1	ATP-dependent protease subunit HslV	-
AB6A22_RS08005 (AB6A22_08020)	hslU	1642060..1643463 (+)	1404	WP_014305002.1	HslU--HslV peptidase ATPase subunit	-
AB6A22_RS08010 (AB6A22_08025)	codY	1643501..1644280 (+)	780	WP_003154263.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
AB6A22_RS08015 (AB6A22_08030)	flgB	1644634..1645023 (+)	390	WP_003154260.1	flagellar basal body rod protein FlgB	-
AB6A22_RS08020 (AB6A22_08035)	flgC	1645023..1645475 (+)	453	WP_003154259.1	flagellar basal body rod protein FlgC	-
AB6A22_RS08025 (AB6A22_08040)	fliE	1645486..1645806 (+)	321	WP_003154258.1	flagellar hook-basal body complex protein FliE	-
AB6A22_RS08030 (AB6A22_08045)	fliF	1645849..1647459 (+)	1611	WP_003154257.1	flagellar basal-body MS-ring/collar protein FliF	-
AB6A22_RS08035 (AB6A22_08050)	fliG	1647472..1648488 (+)	1017	WP_003154256.1	flagellar motor switch protein FliG	-
AB6A22_RS08040 (AB6A22_08055)	fliH	1648481..1649236 (+)	756	WP_015388237.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 29056.24 Da
• Isoelectric Point: 4.6017

>NTDB_id=1034051 AB6A22_RS08010 WP_003154263.1 1643501..1644280(+) (codY) [Bacillus velezensis strain FCW119-1M2]
MALLQKTRIINSMLQAAAGKPVNFKEMAETLRDVIDSNIFVVSRRGKLLGYSINQQIENDRMKKMLEDRQFPEEYTRNLF
NVPETSSNLDINSEYTAFPVENRDLFQAGLTTIVPIIGGGERLGTLILSRLQDQFEDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=1034051 AB6A22_RS08010 WP_003154263.1 1643501..1644280(+) (codY) [Bacillus velezensis strain FCW119-1M2]
ATGGCTTTACTACAAAAAACACGAATTATTAACAGCATGCTGCAGGCTGCGGCAGGCAAACCCGTAAACTTTAAAGAAAT
GGCTGAAACGCTTCGTGACGTCATTGATTCTAATATTTTCGTCGTCAGCCGCAGAGGAAAGCTTTTGGGCTACTCTATTA
ATCAGCAGATTGAAAATGACCGCATGAAAAAAATGCTTGAAGACCGCCAGTTCCCGGAAGAGTACACGAGAAATCTGTTC
AATGTTCCGGAGACGTCTTCAAACCTTGATATCAACAGCGAATACACGGCATTTCCTGTGGAAAACAGAGACCTGTTCCA
AGCGGGCTTAACAACGATCGTGCCGATCATCGGCGGAGGAGAGAGACTGGGCACGCTGATTCTGTCCCGTCTGCAGGATC
AATTTGAAGATGATGATCTCATTCTTGCTGAATACGGGGCAACCGTTGTAGGAATGGAGATTTTAAGAGAAAAAGCGGAA
GAAATCGAAGAAGAGGCGCGAAGCAAAGCGGTTGTTCAAATGGCGATCAGCTCTCTGTCTTACAGTGAACTTGAAGCGAT
TGAGCATATCTTTGAAGAGCTTGACGGAAACGAAGGCTTGCTCGTGGCAAGTAAAATTGCGGACCGTGTCGGCATTACGC
GTTCAGTAATCGTTAACGCGCTGAGAAAGCTGGAAAGCGCAGGCGTCATTGAATCCAGATCACTGGGTATGAAGGGGACG
TACATTAAAGTTCTGAACAACAAATTCCTTATTGAATTGGAAAACCTTAAATCTCATTAA

Domains

Predicted by InterproScan.

• CodY GAF-like domain (CodY) (3-178)

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

3D structure

• AlphaFold DB: I2C545

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	99.228	100	0.992
codY	Lactococcus lactis subsp. lactis strain DGCC12653	47.843	98.456	0.471